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Job DescriptionP35991
Confidence99.59%DateWed Jul 10 14:27:18 BST 2013
Rank448Aligned Residues107
% Identity18%Templatec3nsuA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:phosphatidylinositol 4,5-bisphosphate-binding protein slm1; PDBTitle: a systematic screen for protein-lipid interactions in saccharomyces2 cerevisiae
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  AAVILESIFLKRSQQKKKTSPLNFKKRLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKI
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Template Sequence  FTEIKSGFLERRSKFLK. . . . . SYSKGYYVLTPNFLHEFKTA. DRKKDLVPVMSLALSEC
Template Known Secondary structure 


S
SSSS.....S
SSSSS.
TTT

S
SGGG
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   467..470.........480... ......490.........500... ......510.........520
 
   62.......70.........80.........90.........100.........110.........120.
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Query Sequence  TCVETVIPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELR
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Template Sequence  TVTEHSRKNSTSSPNST. . . . . . . . . . . . . . . . . . . GSDAKFVLHAKHNWVFKADSYESM
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TT...................S
S



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   521........530....... ..540.........550.........560.
 
   122.......130...
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Query Sequence  KRWIHQLKNVIR
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Template Sequence  MSWFDNLKILTS
Template Known Secondary structure  TT

Template Predicted Secondary structure 
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   570.........580.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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