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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank60Aligned Residues266
% Identity38%Templatec3l9pA_
PDB info PDB header:transferaseChain: A: PDB Molecule:anaplastic lymphoma kinase; PDBTitle: crystal structure of the anaplastic lymphoma kinase catalytic domain
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   392.......400.........410.........420... ......430......... 440........
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Query Sequence  YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRG. QYDVAIKMIREGSMSE. . DEFIEEAKV
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Template Sequence  SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGSPLQVAVKTLPEVCSEQDELDFLMEALI
Template Known Secondary structure  GGS
B

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   1106...1110.........1120.........1130.........1140.........1150.........1160.....
 
   449450.........460.........470.........480........ .490.........500..
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Query Sequence  MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE. . . . . . MRHRFQTQQLLEMC
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Template Sequence  ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA
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   1171........1180.........1190.........1200.........1210.........1220.........1230
 
   503......510.........520.........530... ......540...... ...550........
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Query Sequence  KDVCEAMEYLESKQFLHRDLAARNCLVNDQG. . . VVKVSDFGLSRYV. LDDEYTSSVGSK
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Template Sequence  RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM
Template Known Secondary structure  TT


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   1231........1240.........1250.........1260.........1270.........1280.........1290
 
   559560.........570.........580.........590.........600.........610........
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Query Sequence  FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR
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Template Sequence  LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP
Template Known Secondary structure  S
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   1291........1300.........1310.........1320.........1330.........1340.........1350
 
   619620.........630.........640.........650.......
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Query Sequence  PHLASERVYTIMYSCWHEKADERPSFKILLSNILDVMDE
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Template Sequence  PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD
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   1351........1360.........1370.........1380.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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