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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank147Aligned Residues229
% Identity25%Templatec3is5E_
PDB info PDB header:transferaseChain: E: PDB Molecule:calcium-dependent protein kinase; PDBTitle: crystal structure of cdpk kinase domain from toxoplasma gondii,2 tgme49_018720
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   399400.........410.........420.. .......430..... ....440.........450.....
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Query Sequence  PKDLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIREG. . SMSEDEFIEEAKVMMNLSHE
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Template Sequence  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP
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   132.......140.........150.........160.........170.........180.........190.
 
   456...460.........470.........480......... 490.........500.........510..
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Query Sequence  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM. . . RHRFQTQQLLEMCKDVCEAMEYL
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Template Sequence  NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF
Template Known Secondary structure  TB


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   192.......200.........210.........220.........230.........240.........250.
 
   513......520.........530. ........540.........550.........560.........
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Query Sequence  ESKQFLHRDLAARNCLVND. . . QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL
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Template Sequence  HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE. . . . . . . . . . . . . LFKALYMAPEVF
Template Known Secondary structure  TT


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GGGG
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   252.......260.........270.........280...... ...290........
 
   570.........580.........590.........600.........610.........620.........
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Query Sequence  MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASERVYTI
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Template Sequence  K. RDVTFKCDIWSAGVVMYFLLT. GCLPFTGTSLEEVQQKATYKP. . . . . . . LTPQAVDL
Template Known Secondary structure  G.T


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   310 .........320.........330. ........340.........350.. .......360
 
   630.........640.........
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Query Sequence  MYSCWHEKADERPSFKILLS
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Template Sequence  LKQMLTKDPERRPSAAQVLH
Template Known Secondary structure  T
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T
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   370.........380.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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