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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank182Aligned Residues238
% Identity22%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   400.........410.........420.. .......430......... 440.........450......
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Query Sequence  KDLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIREGSMSE. . DEFIEEAKVMMNLSHEK
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPN
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TTT

B


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   74.....80.........90.........100.........110.........120.........130...
 
   457..460.........470.........480.........490.........500.........510......
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Query Sequence  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ
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Template Sequence  IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK. RFSEHDAARIIKQVFSGITYMHKHN
Template Known Secondary structure  B


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   135....140.........150.........160........ .170.........180.........190...
 
   517..520......... 530.........540.........550.........560.........570...
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Query Sequence  FLHRDLAARNCLV. . . NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK
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Template Sequence  IVHRDLKPENILLESKEKDCDIKIIDFGLST. . . . . . . . . . CFQQNTTAYYIAPEVLRGT
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S


GGGSSSSTT


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GGG

GGGGGT
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   194.....200.........210.........220.... .....230.........240...
 
   574.....580.........590.........600.........610.... .....620.........630
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Query Sequence  FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL. . . RLYRPHLASERVYTIM
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Template Sequence  YDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI
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SGGGGGS
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   251........260......... 270.........280.........290.........300.........
 
   631........640.........
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Query Sequence  YSCWHEKADERPSFKILLS
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Template Sequence  RKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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