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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank141Aligned Residues239
% Identity29%Templatec3dtcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 9; PDBTitle: crystal structure of mixed-lineage kinase mlk1 complexed2 with compound 16
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   395....400.........410.........420.........430.........440.........450....
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Query Sequence  WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIREGSMSEDEFIEEAKVMMNLSH
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Template Sequence  LEIDFAELTLEEIIGIGGFGKVYRAFW. IGDEVAVKAAT. . . . . IENVRQEAKLFAMLKH
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   137..140.........150.........160... ......170.... .....180.........190
 
   455....460.........470.........480.........490.........500.........510....
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Query Sequence  EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES
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Template Sequence  PNIIALRGVCLKEL. . CLVMEFARGGPLNRVL. . SGKRIPPDILVNWAVQIARGMNYLHD
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   201........210.... .....220.........230 .........240.........250......
 
   515... .520.........530.........540.........550.........560.........570.
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Query Sequence  KQFL. . . HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY
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Template Sequence  EAIVPIIHRDLKSSNILILQKVENGDLSNKILK. . . . . . . . ITDFGLGAYAWMAPEVIRA
Template Known Secondary structure  SSSS



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SGGGSS

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   259260.........270.........280.........290. ........300.........310
 
   572.......580.........590.........600.........610.... .....620.........630
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Query Sequence  SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL. RLYRPHLASERVYTIM
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Template Sequence  SMFSKGSDVWSYGVLLWELLT. GEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLM
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   324.....330.........340.... .....350.........360.........370.........380..
 
   631........640.........650..
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Query Sequence  YSCWHEKADERPSFKILLSNIL
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Template Sequence  EDCWNPDPHSRPSFTNILDQLT
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   383......390.........400....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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