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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank117Aligned Residues243
% Identity21%Templatec2zv2A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase kinase 2; PDBTitle: crystal structure of human calcium/calmodulin-dependent protein kinase2 kinase 2, beta, camkk2 kinase domain in complex with sto-609
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   397..400.........410.........420.. .......430.........440.........450.....
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Query Sequence  IDPKDLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIREGSMSEDEFIEEAKVMMNLSHE
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Template Sequence  VQLNQYTLKDEI. . GKYGVVKLAYNENDNTYYAMKVLSKK. . . . EQVYQEIAILKKLDHP
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   161........170.. .......180.........190........ .200.........210....
 
   456...460....... ..470.........480.........490.........500.........510...
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Query Sequence  KLVQLYGVCTKQ. . RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE
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Template Sequence  NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP. . TLKPLSEDQARFYFQDLIKGIEYLH
Template Known Secondary structure  TB


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   248.250.........260.........270.........280 .........290.........300.....
 
   514.....520.........530.........540.........550.........560.........570...
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Query Sequence  SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK
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Template Sequence  YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV. GTPAFMAPESLSETR
Template Known Secondary structure  TT




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   306...310.........320.........330.........340......... 350.........360....
 
   574.....580.........590.........600.........610... ......620.........
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Query Sequence  . . . FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG. LRLYRPHLASERVYTI
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Template Sequence  KIFSGKALDVWAMGVTLYCFVF. GQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDL
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   365....370.........380...... ...390.........400.........410.........420...
 
   630.........640.........
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Query Sequence  MYSCWHEKADERPSFKILLS
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Template Sequence  ITRMLDKNPESRIVVPEIKL
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   424.....430.........440...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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