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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank166Aligned Residues242
% Identity23%Templatec2zmcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human mitotic checkpoint kinase mps1 catalytic2 domain apo form
Resolution3.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   396...400.........410.........420.........430......... 440.........450..
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Query Sequence  EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIREGSMSE. . . DEFIEEAKVMMNL
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Template Sequence  SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL
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   519520.........530.........540.........550.........560.........570........
 
   453 ......460.........470.........480.........490.........500.........510
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Query Sequence  S. . HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME
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Template Sequence  QQHSDKIIRLYDYEITDQYIYMVMECGN. IDLNSWLKKKK. SIDPWERKSYWKNMLEAVH
Template Known Secondary structure  GGG
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   579580.........590.........600...... ...610....... ..620.........630......
 
   511........520.........530.........540.........550.........560.........570
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Query Sequence  YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM
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Template Sequence  TIHQHGIVHSDLKPANFLIV. DGMLKLIDFGIAN. . . . . . . . QMDSQVGTVNYMPPEAIK
Template Known Secondary structure  TT






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   637..640.........650...... ...660......... 670.........680.......
 
   571 ........580.........590.........600... ......610.........620.......
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Query Sequence  Y. SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN. . SETAEHIAQGLRLYRPHLASERVY
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Template Sequence  DMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ
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   697..700.........710......... 720.........730.........740.........750.....
 
   628.630.........640.........
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Query Sequence  TIMYSCWHEKADERPSFKILLS
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Template Sequence  DVLKCCLKRDPKQRISIPELLA
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T
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   766...770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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