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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank204Aligned Residues222
% Identity25%Templatec2z7qA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of the n-terminal kinase domain of human rsk-1 bound2 to amp-pcp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   397..400.........410.........420. ........430.........440.........450..
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Query Sequence  IDPKDLTFLKELGTGQFGVVKYGKW. . . . RGQYDVAIKMIREGSMSEDEFIEEAKVMMNL
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Template Sequence  ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL. . . . . . . . . . . . . . . ILADV
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GGGTT
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   57..60.........70.........80.........90...... ...100.
 
   453......460.........470.........480.........490.........500.........510..
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Query Sequence  SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL
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Template Sequence  NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV. MFTEEDVKFYLAELALGLDHL
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TTB

TT


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BS.S

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   120.........130.........140.........150....... ..160.........170........
 
   513......520.........530.........540.........550.........560.........570..
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Query Sequence  ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS
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Template Sequence  HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE. . . . . . . . . . . . . GTVEYMAPEVVNRQ
Template Known Secondary structure  TT


TT
SGGG
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GGG

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   179180.........190.........200.........210. ........220.....
 
   573......580.........590.........600.........610.........620.........630..
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Query Sequence  KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASERVYTIMYS
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Template Sequence  GHSHSADWWSYGVLMFEMLT. GSLPFQGKDRKETMTLILK. AKLGMPQFLSTEAQSLLRA
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.SS
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SS.T




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   238.240.........250....... ..260.........270...... ...280.........290.....
 
   633......640. ........
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Query Sequence  CWHEKADER. . . . . PSFKILLS
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Template Sequence  LFKRNPANRLGSGPDGAEEIKR
Template Known Secondary structure 

SSTTTSTTSSSSTT
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   296...300.........310.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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