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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank171Aligned Residues234
% Identity22%Templatec2x7fA_
PDB info PDB header:transferaseChain: A: PDB Molecule:traf2 and nck-interacting protein kinase; PDBTitle: crystal structure of the kinase domain of human traf2- and2 nck-interacting kinase with wee1chk1 inhibitor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   398.400.........410.........420.. .......430.........440.........450.. ...
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Query Sequence  DPKDLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIREGSMSEDEFIEEAKVMMNL. SHE
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Template Sequence  PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHR
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TTTTTTTT



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   21........30.........40.........50.........60.........70.........80
 
   456...460........ .470.........480......... 490.........500.........510
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Query Sequence  KLVQLYGVCTKQR. . . . PIFIITEYMANGCLLNYLREM. RHRFQTQQLLEMCKDVCEAME
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Template Sequence  NIATYYGAFIKKNGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS
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   81........90.........100.........110.........120.........130.........140
 
   511........520.........530.........540.........550.........560.........570
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Query Sequence  YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM
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Template Sequence  HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS. . . . . . . . . . . . . . AGTPYWMAPEVIA
Template Known Secondary structure  TT





SGGG
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   143......150.........160.........170..... ....180........
 
   571........580.........590.........600.........610..... ....620.........
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Query Sequence  YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR. LYRPHLASERVYTI
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Template Sequence  . . . YDFKSDLWSLGITAIEMAE. GAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSF
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   210.........220........ .230.........240.........250.........260.....
 
   630.........640.........
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Query Sequence  MYSCWHEKADERPSFKILLS
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Template Sequence  IESCLVKNHSQRPATEQLMK
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T
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   266...270.........280.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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