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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank132Aligned Residues247
% Identity22%Templatec2vrxB_
PDB info PDB header:cell cycle/transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 12-a; PDBTitle: structure of aurora b kinase in complex with zm447439
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   396...400...... ...410.........420.. .......430... ......440.........
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Query Sequence  EIDPKDLTFLK. ELGTGQFGVVKYGKWR. GQYDVAIKMIR. . . . EGSMSEDEFIEEAKVM
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Template Sequence  EMPKRKFTIDDFDIGRPLGGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ
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GGG


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   82.......90.........100.........110.........120.........130.........140.
 
   450.........460.........470.........480.........490.........500.........
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Query Sequence  MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM
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Template Sequence  SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG. RFDEQRSATFMEELADAL
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   146...150.........160.........170.........180...... ...190.........200....
 
   510.........520.........530.........540.........550.........560.........
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Query Sequence  EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL
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Template Sequence  HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR. . . . RRMCGTLDYLPPEMI
Template Known Secondary structure  TT



SGGG
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TT

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   205....210.........220.........230.........240..... ....250.........260
 
   570.........580.........590.........600.........610.........620.........
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Query Sequence  MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASERVYTI
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Template Sequence  EGKTHDEKVDLWCAGVLCYEFLV. GMPPFDSPSHTETHRRIVNV. DLKFPPFLSDGSKDL
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B
TT.SS
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   262.......270.........280.... .....290.........300.... .....310.........
 
   630.........640.........
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Query Sequence  MYSCWHEKADERPSFKILLS
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Template Sequence  ISKLLRYHPPQRLPLKGVME
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   320.........330.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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