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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank209Aligned Residues244
% Identity22%Templatec2qr8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-3; PDBTitle: 2.0a x-ray structure of c-terminal kinase domain of p90 ribosomal s62 kinase 2 (rsk2)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   400.........410.........420.. .......430.........440.........450. ......
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Query Sequence  KDLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIREGSMSEDEFIEEAKVMMN. LSHEKL
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Template Sequence  DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS. . . KRDPTEEIEILLRYGQHPNI
Template Known Secondary structure  TT
SSTTTTTT...T

TTTSTTB
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   420.........430.........440.........450...... ...460.........470......
 
   458.460.........470.........480.........490.........500.........510.......
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Query Sequence  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF
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Template Sequence  ITLKDVYDDGKYVYVVTELMKGGELLDKI. LRQKFFSEREASAVLFTITKTVEYLHAQGV
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SS


S
B.T
TT

TT
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   477..480.........490.........500..... ....510.........520.........530.....
 
   518.520.........530... ......540.........550.........560.........570...
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Query Sequence  LHRDLAARNCLVNDQG. . . . VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK
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Template Sequence  VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN. FVAPEVLERQG
Template Known Secondary structure 
S


GGGSSSS

GGG


TT

B
TTS
B

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   536...540.........550.........560.........570.........580... ......590....
 
   574.....580.........590.........600... ......610........ .620.......
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Query Sequence  FSSKSDIWAFGVLMWEIYSLGKMPYERFTN. . . SETAEHIAQGLRLYR. . . PHLASERVY
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Template Sequence  YDAACDIWSLGVLLYTMLT. GYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK
Template Known Secondary structure  .SS
SS
SSTTS
T



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   595....600.........610... ......620.........630.........640.........650...
 
   628.630.........640.........
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Query Sequence  TIMYSCWHEKADERPSFKILLS
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Template Sequence  DLVSKMLHVDPHQRLTAALVLR
Template Known Secondary structure  S
SSTTTS

T
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   654.....660.........670.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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