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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank243Aligned Residues266
% Identity24%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410.........420.........430......... 440.........
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Query Sequence  GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIREGSMSE. DEFIEEAKVM
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Template Sequence  PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETL
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S



S
B
SSS
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SSGG
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   30.........40.........50.........60.........70.........80.........
 
   450.........460.........470.........480......... 490.........500......
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Query Sequence  MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM. . . RHRFQTQQLLEMCKDVC
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Template Sequence  SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA
Template Known Secondary structure  GS


TTB




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TT
BTGGGSSSS


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   90.........100.........110.........120.........130.........140.........
 
   507..510.........520.........530.........540.........550.........560......
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Query Sequence  EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP
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Template Sequence  RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLVVKGTLG. YIDP
Template Known Secondary structure  TT
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STT
TT




TT

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S
TT.T

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   150.........160.........170.........180.........190.........200.... ....
 
   567..570.........580.........590.........600.........610..
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Query Sequence  EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ. . . . . . . . . . . . . .
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Template Sequence  EYFIKGRLTEKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV
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T.

TT
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TTTT


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   211........220.........230...... ...240.........250.........260.........
 
   613......620.........630.........640.........650........
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Query Sequence  . . GLRLYRPHLASERVYTIMYSCWHEKADERPSFKILLSNILDVMDEE
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Template Sequence  DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ
Template Known Secondary structure  SSS
TT
S
T
SSGGGS

SS
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   270.........280.........290.........300.........310.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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