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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank294Aligned Residues229
% Identity25%Templatec2qkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   404.....410.........420.........430.........440.........450.........460...
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Query Sequence  FLKELGTGQFGVVKYGKWRGQYDVAIKMIREGSMSEDEFIEEAKVMMNLSHEKLVQLYGV
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Template Sequence  MEKYLEKVGEGVVYKAKD. SQRIVALKRIS. . . . . . . TAIREISLLKELHHPNIVSLIDV
Template Known Secondary structure  S
B


B





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   20.........30....... ..40........ .50.........60.........70.
 
   464.....470.........480.........490.........500.........510.........520...
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Query Sequence  CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA
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Template Sequence  IHSECL. TLVFEFMEKDLKKVLD. ENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK
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   88.90... ......100......... 110.........120.........130.........140.....
 
   524.....530.........540.........550.........560.........570.........580...
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Query Sequence  ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF
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Template Sequence  PQNLLI. NSDALKLADFGLARAFGIPVRVVTLWY. . . . . RAPDVLMGSKKYSTSVDIWSI
Template Known Secondary structure  GGG.






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T
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   147..150.. .......160.........170......... 180.........190.........200
 
   584.....590.........600.........610.........
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Query Sequence  GVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GCIFAEMIT. GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKP
Template Known Secondary structure  .SS
S


SSGGG



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TTGGGSS






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   207..210..... ....220.........230.........240.........250.........260.....
 
   620.........630.........640.........
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Query Sequence  . . . . . HLASERVYTIMYSCWHEKADERPSFKILLS
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Template Sequence  WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN
Template Known Secondary structure  STT

S
S
TTTS

T
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   266...270.........280.........290.........300
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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