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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank63Aligned Residues241
% Identity25%Templatec2jamB_
PDB info PDB header:transferaseChain: B: PDB Molecule:calcium/calmodulin-dependent protein kinase type PDBTitle: crystal structure of human calmodulin-dependent protein2 kinase i g
Resolution1.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   399400.........410.........420.. .......430.........440.........450.......
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Query Sequence  PKDLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIREGSMSEDEFIEEAKVMMNLSHEKL
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Template Sequence  RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK. . . . . SSLENEIAVLKKIKHENI
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   20.........30.........40.........50...... ...60.........70....
 
   458.460.........470.........480.........490.........500.........510.......
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Query Sequence  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF
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Template Sequence  VTLEDIYESTTHYYLVMQLVSGGELFDRILERG. VYTEKDASLVIQQVLSAVKYLHENGI
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   82.......90.........100.........110.... .....120.........130.........140
 
   518.520......... 530.........540.........550.........560.........570....
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Query Sequence  LHRDLAARNCLV. . . NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF
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Template Sequence  VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP. . . GYVAPEVLAQKPY
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GGG
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   141........150.........160.........170.........180.... .....190.......
 
   575....580.........590.........600.........610..... ....620.........630.
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Query Sequence  SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR. . . LYRPHLASERVYTIMY
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Template Sequence  SKAVDCWSIGVITYILLC. GYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFIC
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   198.200.........210..... ....220.........230.........240.........250......
 
   632.......640.........
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Query Sequence  SCWHEKADERPSFKILLS
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Template Sequence  HLLEKDPNERYTCEKALS
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   257..260.........270....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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