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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank156Aligned Residues239
% Identity25%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   400.........410.........420.. .......430......... 440.........450.
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Query Sequence  KDLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIREGSMSE. . . . . . . DEFIEEAKVMMN
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Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK
Template Known Secondary structure  TTTTTTGGG



TT

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   36...40.........50.........60.........70.........80.........90.....
 
   452. ......460.........470.........480.........490.........500.........
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Query Sequence  LS. . HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM
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Template Sequence  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV
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SSS
SB


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   96...100.........110.........120.........130.........140.........150.....
 
   510.........520.........530 .........540.........550.........560........
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Query Sequence  EYLESKQFLHRDLAARNCLVN. DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV
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Template Sequence  RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR. . . VYSPPEW
Template Known Secondary structure  TT



SGGGTTTT


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   156...160.........170.........180.........190.........200..... ....210..
 
   569570.... .....580.........590.........600.........610.........620.......
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Query Sequence  LMYSKF. SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASERVY
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Template Sequence  IRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEE. . . . . . . IIGGQVFFRQRVSSECQ
Template Known Secondary structure  S
B
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   213......220.........230....... ..240....... ..250.........260....
 
   628.630.........640.........
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Query Sequence  TIMYSCWHEKADERPSFKILLS
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Template Sequence  HLIRWCLALRPSDRPTFEEIQN
Template Known Secondary structure  T
SSGGGS

T
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   265....270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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