Job Description P35991 Confidence 99.59% Date Wed Jul 10 14:27:18 BST 2013 Rank 447 Aligned Residues 103 % Identity 21% Template c2dtcB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:ral guanine nucleotide exchange factor ralgps1a; PDBTitle: crystal structure of ms0666 Resolution 1.70 Å

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		6	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.
Predicted Secondary structure										.	.	.																																							.	.	.	.	.
Query SS confidence										.	.	.																																							.	.	.	.	.
Query Sequence		L	E	S	I	F	L	K	R	.	.	.	S	Q	Q	K	K	K	T	S	P	L	N	F	K	K	R	L	F	L	L	T	V	H	K	L	S	Y	Y	E	Y	D	F	E	R	G	R	R	G	S	.	.	.	.	.	K	K	G	S	I	D
Query Conservation										.	.	.																																							.	.	.	.	.
Alig confidence										.	.	.							.																																.	.	.	.	.
Template Conservation																			.
Template Sequence		X	E	G	P	L	R	R	K	T	L	L	K	E	G	R	K	P	.	A	L	S	S	W	T	R	Y	W	V	V	L	S	G	A	T	L	L	Y	Y	G	A	K	S	L	R	G	T	D	R	K	H	Y	K	S	T	P	G	K	K	V	S
Template Known Secondary structure													B	T	T	B			.	S													T	T							B	S	S	S	S			S	G	G	G	B		S	S		S
Template Predicted Secondary structure																			.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		V	E	K	I	T	C	V	E	T	V	I	P	E	K	N	P	P	P	E	R	Q	I	P	R	R	G	E	E	S	S	E	M	E	Q	I	S	I	I	E	R	F	P	Y	P	F	Q	V	V	Y	.	.	D	E	G	P	L	Y	V	F	S
Query Conservation																																																			.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	G	W	X	V	Q	L	P	D	D	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	D	I	F	Q	L	N	N	P	D	K	G	N	V	Y	K	F	Q	T
Template Known Secondary structure			T	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T							T	T	S		S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.																												.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	E	E	L	R	K	R	W	I	H	Q	L	K	N	V	I	R	Y	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	R	F	H	A	I	L	W	H	K	H	L	D	D	A	C	K	S	S	R
Template Known Secondary structure		S	S																T	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D