Return to main results Retrieve Phyre Job Id

Job DescriptionP35991
Confidence99.71%DateWed Jul 10 14:27:18 BST 2013
Rank411Aligned Residues108
% Identity19%Templatec2d9wA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:docking protein 2; PDBTitle: solution structure of the ph domain of docking protein 22 from human
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30...... ...40.........50.......
Predicted Secondary structure 














......












Query SS confidence 
































. . . . . .




















Query Sequence  VILESIFLKRSQQKKKTSPLNFKKRLFLLTVHK. . . . . . LSYYEYDFERGRRGSKKGSID
Query Conservation      
 
 

   
      
 
 
 


    ......
 

               
 
Alig confidence 











...

















......




















Template Conservation 




 
 
   ...    
 







          
 
                
 
Template Sequence  AVKQGFLYLQQQ. . . QTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIR
Template Known Secondary structure  SS
B
...SSSS
B



SSSS




S
SSS
S


Template Predicted Secondary structure 

...






























Template SS confidence 



























































   12.......20... ......30.........40.........50.........60........
 
   58.60.........70.........80.........90.........100.........110.......
Predicted Secondary structure 






































Query SS confidence 



























































Query Sequence  VEKITCVETVIPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPT
Query Conservation 
  
  

 
                                  


      

  
  
Alig confidence 

















......................



















Template Conservation 
                 ......................    
 
 
  
    

  
Template Sequence  LSDCLRVAEAGGEASSPR. . . . . . . . . . . . . . . . . . . . . . DTSAFFLETKERLYLLAAPA
Template Known Secondary structure  GGG

S
SSS
S......................S
SS

Template Predicted Secondary structure 















......................







Template SS confidence 



























































   6970.........80...... ...90.........100......
 
   118.120.........130.......
Predicted Secondary structure 




Query SS confidence 



















Query Sequence  EELRKRWIHQLKNVIRYNSD
Query Conservation     
  

 


     
  
Alig confidence 
.

















Template Conservation 
.
   

 

   
   
 
Template Sequence  A. ERGDWVQAICLLAFSGPS
Template Known Secondary structure  .TSS

Template Predicted Secondary structure  .




Template SS confidence 



















   107 ..110.........120.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D