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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank6Aligned Residues421
% Identity37%Templatec2c0iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: src family kinase hck with bound inhibitor a-420983
Resolution2.30 Å
Model Dimensions (Å)X:78.039 Y:73.570 Z:54.337

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230.........240.........250...... ...260.........270......
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Query Sequence  KVVALYDYMPMNANDLQLRKGEEYFILEESNLPWWRARD. KNGQEGYIPSNYITEAEDSI
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Template Sequence  IVVALYDYEAIHHEDLSFQKGDQMVVL. EESGEWWKARSLATRKEGYIPSNYVARV. DSL
Template Known Secondary structure  SS
B


SSSB

B
TT
.TTTTT

GGGT.TSG
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   61........70.........80....... ..90.........100.........110..... ...
 
   277..280.........290......... 300......... 310.........320.........330....
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Query Sequence  EMYEWYSKHMTRSQAEQLLKQEG. KEGGFIVRDS. SKAGKYTVSVFAKSTGEPQGVIRHY
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Template Sequence  ETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQG. DTVKHY
Template Known Secondary structure  GGSTTTT

TSTT

TT

SSSTT
TTT.
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   119120.........130.........140.........150.........160.........170. ......
 
   335....340.........350.........360.........370.........380.........390....
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Query Sequence  VVCSTPQSQYYLAEKHLFSTIPELINYHQHNSAGLISRLKYPVSKQNKNAPSTAGLGYGS
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Template Sequence  KIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCMSSKPQKPW. . . . EKDA
Template Known Secondary structure  B

STT
SSTTSSSTTSS
SS
SS


SB









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TT
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   178.180.........190.........200.........210.........220......... 230...
 
   395....400.........410.........420.........430.........440.........450....
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Query Sequence  WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIREGSMSEDEFIEEAKVMMNLSH
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Template Sequence  WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH
Template Known Secondary structure  SB

GGGTTTTT


SS
T


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   234.....240.........250.........260.........270.........280.........290...
 
   455....460.........470.........480......... 490.........500.........510...
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Query Sequence  EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM. RHRFQTQQLLEMCKDVCEAMEYLE
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Template Sequence  DKLVKLHAVV. TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE
Template Known Secondary structure  TTB

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SSS


TT
BSTTGGG

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   294.....300... ......310.........320.........330.........340.........350..
 
   514.....520.........530.........540.........550.........560.........570...
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Query Sequence  SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK
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Template Sequence  QRNYIHRDLRAANILVSASLVCKIADFGLAR. . . . . . . . . . . . . VIPIKWTAPEAINFGS
Template Known Secondary structure  TT


S

SGGG
TT



TTGGG.............T

GGGS


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   353......360.........370.........380... ......390.........
 
   574.....580.........590.........600.........610.........620.........630...
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Query Sequence  FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASERVYTIMYSC
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Template Sequence  FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRC
Template Known Secondary structure 

TTT

SSTT

TT





TT

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   413......420.........430.........440.........450.........460.........470..
 
   634.....640.........650.........
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Query Sequence  WHEKADERPSFKILLSNILDVMDEES
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Template Sequence  WKNRPEERPTFEYIQSVLDDFYTATE
Template Known Secondary structure  T
SSGGGS

TTTS
GG
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   473......480.........490........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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