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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank23Aligned Residues253
% Identity21%Templatec2acxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein coupled receptor kinase 6 bound to2 amppnp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   393......400.........410.........420.. .......430... ......440.......
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Query Sequence  GSWEIDPKDLTFLKELGTGQFGVVKYGKWR. GQYDVAIKMIR. . . . EGSMSEDEFIEEAK
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Template Sequence  ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ
Template Known Secondary structure  TS


GGGTTTTT

TT
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   177..180.........190.........200.........210.........220.........230......
 
   448.450.........460.........470.........480.........490.........500.......
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Query Sequence  VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE
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Template Sequence  ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI. YHMAGFPEARAVFYAAEICC
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TTB


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   237..240.........250.........260.........270..... ....280.........290.....
 
   508.510.........520.........530.........540.........550.........560.......
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Query Sequence  AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE
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Template Sequence  GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ. . TIKGRVGTVGYMAPE
Template Known Secondary structure  TT



SGGG
TTS



TT


TT
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GGG

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   298.300.........310.........320.........330.........340 .........350.....
 
   568.570.........580.........590.........600.........610.........620.......
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Query Sequence  VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASERVY
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Template Sequence  VVKNERYTFSPDWWALGCLLYEMIA. GQSPFQQKIKREEVERLVKEVPEEYSERFSPQAR
Template Known Secondary structure  TT
SS.SS
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   356...360.........370.........380 .........390.........400.........410....
 
   628.630.........640. ........
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Query Sequence  TIMYSCWHEKADER. . . . . PSFKILLS
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Template Sequence  SLCSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  S
SSGGGSTTSSSSTT
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   418.420.........430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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