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Job DescriptionP35991
Confidence100.00%DateWed Jul 10 14:27:18 BST 2013
Rank29Aligned Residues248
% Identity17%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   396...400.........410.........420... ......430.........440 .......
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Query Sequence  EIDPKDLTFLKELGTGQFGVVKYGKWRG. QYDVAIKMIREGSMSED. . . . . . . EFIEEAK
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Template Sequence  HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS
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   185....190.........200.........210.........220.........230.........240....
 
   448.450.........460.........470.........480.........490.........500.......
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Query Sequence  VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE
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Template Sequence  LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG. VFSEADMRFYAAEIIL
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   245....250.........260.........270.........280....... ..290.........300...
 
   508.510.........520.........530.........540.........550.........560.......
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Query Sequence  AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE
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Template Sequence  GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH. . . GYMAPE
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   304.....310.........320.........330.........340.........350.... .....360
 
   568. 570.........580.........590.........600 .........610.........620...
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Query Sequence  VL. MYSKFSSKSDIWAFGVLMWEIYSLGKMPYER. . . FTNSETAEHIAQGLRLYRPHLAS
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Template Sequence  VLQKGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLT. MAVELPDSFS
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T.SS
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   361........370.........380...... ...390.........400........ .410........
 
   624.....630.........640.. .......
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Query Sequence  ERVYTIMYSCWHEKADERP. . . . . SFKILLS
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Template Sequence  PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE
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   419420.........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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