Job Description P35991 Confidence 99.64% Date Wed Jul 10 14:27:18 BST 2013 Rank 426 Aligned Residues 105 % Identity 19% Template c1u5fA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:src-associated adaptor protein; PDBTitle: crystal structure of the ph domain of skap-hom with 8 vector-derived2 n-terminal residues Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	A	V	I	L	E	S	I	F	L	K	R	S	Q	Q	K	K	K	T	S	P	L	N	F	K	K	R	L	F	L	L	T	V	H	K	L	S	Y	Y	E	Y	D	F	E	R	G	R	R	G	S	K	K	G	S	I	D	V	E	K
Query Conservation
Alig confidence																		.																								.	.	.	.
Template Conservation																		.																								.	.	.	.
Template Sequence		L	P	F	V	I	K	A	G	Y	L	E	K	R	R	K	D	.	H	S	F	L	G	F	E	W	Q	K	R	W	C	A	L	S	K	T	V	F	Y	Y	Y	.	.	.	.	G	S	D	K	D	K	Q	Q	K	G	E	F	A	I	D	G
Template Known Secondary structure			S	S														.	S	S		S	S		S										T	T						.	.	.	.	S	S	T	T		S	S		S						T	T
Template Predicted Secondary structure																		.																								.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		I	T	C	V	E	T	V	I	P	E	K	N	P	P	P	E	R	Q	I	P	R	R	G	E	E	S	S	E	M	E	Q	I	S	I	I	E	R	F	P	Y	P	F	Q	V	V	Y	D	E	.	G	P	L	Y	V	F	S	P	T	E	E
Query Conservation																																																		.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	V	R	M	N	N	T	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	G	K	K	D	C	C	F	E	I	C	A	P	D	K	R	I	Y	Q	F	T	A	A	S	P	K
Template Known Secondary structure								T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T	G	G	G							T	T	S								S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.																								.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	K	R	W	I	H	Q	L	K	N	V	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	E	E	W	V	Q	Q	L	K	F	I	L	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D