Return to main results Retrieve Phyre Job Id

Job DescriptionP15498
Confidence98.48%DateFri May 25 09:26:45 BST 2012
Rank298Aligned Residues108
% Identity27%Templatec1x6cA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: solution structures of the sh2 domain of human protein-2 tyrosine phosphatase shp-1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   664.....670.........680........ .690.........700.........710.... .....720.........730...
Predicted Secondary structure 
























.


















.........









Query SS confidence 
























.

























. . . . . . . . .


















Query Sequence  QDLSVHLWYAGPMERAGAESILANR. SDGTFLVRQRVKDAAEFAISIKYNVE. . . . . . . . . VKHIKIMTAEGLYRITEKK
Query Conservation            
   
  
   
   .  
   

 
        


     .........
    
    
        
Alig confidence 
























.

























.........


















Template Conservation         



 


 


 

      
 



 
      
 


          
     
  
             
Template Sequence  GSSGSSGWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLE
Template Known Secondary structure 

S






SS



SS
SSSTT
SSSTTS
TTSSSS
Template Predicted Secondary structure 






































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   734.....740.........750.........760.........770..
Predicted Secondary structure 






































Query SS confidence 






































Query Sequence  AFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRT
Query Conservation   
 
   

      
              
        
Alig confidence 



















.

















Template Conservation   
 

  

  
    
   . 
    
  
    

  
Template Sequence  TFDSLTDLVEHFKKTGIEEA. SGAFVYLRQPYYSGPSSG
Template Known Secondary structure 
BSS

S.SS







S


Template Predicted Secondary structure 









.













Template SS confidence 






































   81........90.........100 .........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions