Return to main results Retrieve Phyre Job Id

Job DescriptionP15498
Confidence99.45%DateFri May 25 09:26:45 BST 2012
Rank239Aligned Residues152
% Identity24%Templatec1x27F_
PDB info PDB header:signaling proteinChain: F: PDB Molecule:proto-oncogene tyrosine-protein kinase lck; PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   601........610.........620.........630.........640.........650.........660.........670.........680
Predicted Secondary structure 










































































Query SS confidence 















































































Query Sequence  QEYYGLPPPPGAIGPFLRLNPGDIVELTKAEAEQNWWEGRNTSTNEIGWFPCNRVKPYVHGPPQDLSVHLWYAGPMERAG
Query Conservation           
       
   

 
          
           
  

  
                  
   
  
Alig confidence 





























..



























.....














Template Conservation      
          

    

   
   ..   
           
  
   
    
.....

   

 
 


 
Template Sequence  NLVIALHSYEPSHDGDLGFEKGEQLRILEQ. . SGEWWKAQSLTTGQEGFIPFNFVAKANS. . . . . LEPEPWFFKNLSRKD
Template Known Secondary structure 
SS
B


STTB

B
TT



..BTTSSS

GGG
S
.....STTSTTB
SS

Template Predicted Secondary structure 


















..













.....








Template SS confidence 















































































   64.....70.........80.........90... ......100.........110.........120. ........130......
 
   681.. ......690.........700.........710.........720. ........730.........740.........750..
Predicted Secondary structure 


..























......




























Query SS confidence 


. .





































. . . . . .






























Query Sequence  AES. . ILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIM. . . . . . TAEGLYRITEKKAFRGLTELVEFYQQNSLKD
Query Conservation 
  .. 
     
   

 
        


     
    
 ......   
         
 
   

      
   
Alig confidence 


..





































......



























...
Template Conservation 

  

      
 



 
      
 


          
                    
 

  

  
    ...
Template Sequence  AERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNAS. . .
Template Known Secondary structure  TSSS

TT
SSSTT

SSS

TTS
SSTT

BSS

...
Template Predicted Secondary structure 
































...
Template SS confidence 















































































   137..140.........150.........160.........170.........180.........190.........200.........210...
 
   753......760....
Predicted Secondary structure 











Query SS confidence 











Query Sequence  CFKSLDTTLQFP
Query Conservation             
Alig confidence  ..









Template Conservation  ..  
   
  
Template Sequence  . . DGLCTRLSRP
Template Known Secondary structure  ..SSSSS


Template Predicted Secondary structure  ..







Template SS confidence 











   214.....220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions