Job Description P15498 Confidence 96.28% Date Fri May 25 09:26:45 BST 2012 Rank 463 Aligned Residues 71 % Identity 15% Template c1sjjB_ PDB info PDB header:contractile protein Chain: B: PDB Molecule:actinin; PDBTitle: cryo-em structure of chicken gizzard smooth muscle alpha-2 actinin Resolution 20.00 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	A	Q	V	C	E	L	A	Q	A	L	R	D	G	V	L	L	C	Q	L	L	N	N	L	L	P	H	A	I	N	L	R	E	V	N	L	R	P	Q	M	S	Q	F	L	C	L	K	N	I	R	T	F	L	S	T	C	C	E	K	F	G	L	K	R	S	E	L	F	E	A	F	D	L	F	D	V	Q	D
Query Conservation
Alig confidence																																										.	.	.	.	.	.																				.	.
Template Conservation																																										.	.	.	.	.	.																				.	.
Template Sequence		K	N	V	N	I	Q	N	F	H	I	S	W	K	D	G	L	G	F	C	A	L	I	H	R	H	R	P	E	L	I	D	Y	G	K	L	R	K	D	D	P	.	.	.	.	.	.	L	T	N	L	N	T	A	F	D	V	A	E	K	Y	L	D	I	P	K	.	.	M	L	D	A	E	D	I	V	G	T	A	R
Template Known Secondary structure		T	T						T	T	G	G	G	T	T	S												G	G	G							T	T				.	.	.	.	.	.	G	G	G	T	T									T	T					.	.		S						T	S	S	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.																				.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.							.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions