Emaill.a.kelley@imperial.ac.uk
DescriptionP39023
DateThu Apr 26 09:26:30 BST 2012
Unique Job IDfe687422d43f91ad

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c3iz5C_



100.0 68 PDB header:ribosome
Chain: C: PDB Molecule:60s ribosomal protein l3 (l3p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
2c4a1aB_



100.0 63 PDB header:ribosome
Chain: B: PDB Molecule:ribosomal protein l3;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3.
3c3jywC_



100.0 67 PDB header:ribosome
Chain: C: PDB Molecule:60s ribosomal protein l3;
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
4c2zkrb_



100.0 98 PDB header:ribosomal protein/rna
Chain: B: PDB Molecule:rna expansion segment es4;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
5c1s1iC_



100.0 67 PDB header:ribosome
Chain: C: PDB Molecule:60s ribosomal protein l3;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h.
6d1vqob1



100.0 37 Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Ribosomal protein L3
7d2gycb1



100.0 25 Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Ribosomal protein L3
8d2zjrb1



100.0 25 Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Ribosomal protein L3
9d2j01e1



100.0 29 Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Ribosomal protein L3
10c2ftcC_



100.0 21 PDB header:ribosome
Chain: C: PDB Molecule:mitochondrial 39s ribosomal protein l3;
PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome
11c3bboF_



100.0 29 PDB header:ribosome
Chain: F: PDB Molecule:ribosomal protein l3;
PDBTitle: homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome
12c3rykB_



59.7 18 PDB header:isomerase
Chain: B: PDB Molecule:dtdp-4-dehydrorhamnose 3,5-epimerase;
PDBTitle: 1.63 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose2 3,5-epimerase (rfbc) from bacillus anthracis str. ames with tdp and3 ppi bound
13d1ep0a_



46.8 13 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:dTDP-sugar isomerase
14c1upiA_



42.7 14 PDB header:epimerase
Chain: A: PDB Molecule:dtdp-4-dehydrorhamnose 3,5-epimerase;
PDBTitle: mycobacterium tuberculosis rmlc epimerase (rv3465)
15d1wlta1



41.9 20 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:dTDP-sugar isomerase
16d1dzra_



41.4 20 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:dTDP-sugar isomerase
17d1oi6a_



35.5 18 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:dTDP-sugar isomerase
18d2ixca1



34.9 13 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:dTDP-sugar isomerase
19c2qtxL_



34.4 29 PDB header:rna binding protein
Chain: L: PDB Molecule:uncharacterized protein mj1435;
PDBTitle: crystal structure of an hfq-like protein from methanococcus2 jannaschii
20c2c0zA_



33.1 16 PDB header:isomerase
Chain: A: PDB Molecule:novw;
PDBTitle: the 1.6 a resolution crystal structure of novw: a 4-keto-6-2 deoxy sugar epimerase from the novobiocin biosynthetic3 gene cluster of streptomyces spheroides
21c3ejkA_



not modelled 31.0 27 PDB header:isomerase
Chain: A: PDB Molecule:dtdp sugar isomerase;
PDBTitle: crystal structure of dtdp sugar isomerase (yp_390184.1) from2 desulfovibrio desulfuricans g20 at 1.95 a resolution
22d2c0za1



not modelled 30.1 16 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:dTDP-sugar isomerase
23d2ixha1



not modelled 27.8 25 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:dTDP-sugar isomerase
24d1xhca3



not modelled 13.5 45 Fold:CO dehydrogenase flavoprotein C-domain-like
Superfamily:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Family:FAD/NAD-linked reductases, dimerisation (C-terminal) domain
25d1ekga_



not modelled 11.9 24 Fold:N domain of copper amine oxidase-like
Superfamily:Frataxin/Nqo15-like
Family:Frataxin-like
26c1vbiA_



not modelled 8.3 25 PDB header:oxidoreductase
Chain: A: PDB Molecule:type 2 malate/lactate dehydrogenase;
PDBTitle: crystal structure of type 2 malate/lactate dehydrogenase from thermus2 thermophilus hb8
27d1vqoq1



not modelled 8.1 22 Fold:SH3-like barrel
Superfamily:Translation proteins SH3-like domain
Family:Ribosomal proteins L24p and L21e
28c1htmB_



not modelled 7.5 43 PDB header:viral protein
Chain: B: PDB Molecule:hemagglutinin ha2 chain;
PDBTitle: structure of influenza haemagglutinin at the ph of membrane2 fusion
29d1inva_



not modelled 6.8 36 Fold:6-bladed beta-propeller
Superfamily:Sialidases
Family:Sialidases (neuraminidases)
30c3ij2B_



not modelled 6.7 16 PDB header:hormone/protein binding
Chain: B: PDB Molecule:beta-nerve growth factor;
PDBTitle: ligand-receptor structure
31c1s1iQ_



not modelled 6.7 20 PDB header:ribosome
Chain: Q: PDB Molecule:60s ribosomal protein l21-a;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h.
32d1bndb_



not modelled 6.7 14 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Neurotrophin
33c2zkrq_



not modelled 6.7 10 PDB header:ribosomal protein/rna
Chain: Q: PDB Molecule:rna expansion segment es31 part ii;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
34d1wwwv_



not modelled 6.5 21 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Neurotrophin
35d2gqfa1



not modelled 6.4 26 Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:HI0933 N-terminal domain-like
36c1zuyB_



not modelled 6.4 7 PDB header:contractile protein
Chain: B: PDB Molecule:myosin-5 isoform;
PDBTitle: high-resolution structure of yeast myo5 sh3 domain
37c1a3qA_



not modelled 6.2 21 PDB header:transcription/dna
Chain: A: PDB Molecule:protein (nuclear factor kappa-b p52);
PDBTitle: human nf-kappa-b p52 bound to dna
38c2rqrA_



not modelled 6.0 0 PDB header:protein binding
Chain: A: PDB Molecule:engulfment and cell motility protein 1, linker, dedicator
PDBTitle: the solution structure of human dock2 sh3 domain - elmo1 peptide2 chimera complex
39c2eg9B_



not modelled 5.8 14 PDB header:hydrolase
Chain: B: PDB Molecule:adp-ribosyl cyclase 1;
PDBTitle: crystal structure of the truncated extracellular domain of2 mouse cd38
40d1b7go1



not modelled 5.8 29 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
41c3hfkB_



not modelled 5.7 20 PDB header:isomerase
Chain: B: PDB Molecule:4-methylmuconolactone methylisomerase;
PDBTitle: crystal structure of 4-methylmuconolactone methylisomerase2 (h52a) in complex with 4-methylmuconolactone
42d1t11a3



not modelled 5.6 16 Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
43d1jjga_



not modelled 5.5 8 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
44c3fq6A_



not modelled 5.4 45 PDB header:transferase
Chain: A: PDB Molecule:methyltransferase;
PDBTitle: the crystal structure of a methyltransferase domain from bacteroides2 thetaiotaomicron vpi
45c3iz5O_



not modelled 5.4 26 PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l27a (l15p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
46d1s1da_



not modelled 5.4 17 Fold:5-bladed beta-propeller
Superfamily:Apyrase
Family:Apyrase
47c3fyfA_



not modelled 5.2 10 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein bvu-3222;
PDBTitle: crystal structure of uncharacterized protein bvu_3222 from2 bacteroides vulgatus