Job Description P39023 Confidence 100.00% Date Thu Apr 26 09:26:30 BST 2012 Rank 8 Aligned Residues 202 % Identity 25% Template d2zjrb1 SCOP info Reductase/isomerase/elongation factor common domain Translation proteins Ribosomal protein L3 Resolution 2.91

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	F	L	G	Y	K	A	G	M	T	H	I	V	R	E	V	D	R	P	G	S	K	V	N	K	K	E	V	V	E	A	V	T	I	V	E	T	P	P	M	V	V	V	G	I	V	G	Y	V	E	T	P	R	G	L	R	T	F	K	T	V	F	A	E	H	I	S	D	E	C	K	R	R	F	Y	K	N	W
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	G	I	L	G	T	K	I	G	M	T	Q	I	W	K	N	D	R	.	.	.	.	.	.	.	.	.	.	.	A	I	P	V	T	V	V	L	A	G	P	C	P	I	V	Q	R	K	T	A	Q	T	D	G	Y	E	A	V	Q	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		T	T		.	.	.	.	.	.	.	.	.	.	.																				T	T	T	T	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.												20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	S	K	K	K	A	F	T	K	Y	C	K	K	W	Q	D	E	D	G	K	K	Q	L	E	K	D	F	S	S	M	K	K	Y	C	Q	V	I	R	V	I	A	H	T	Q	M	R	L	L	P	L	R	Q	K	K	A	H	L	M	E	I	Q	V	N	G	G	T	V	A	E	K	L	D	W	A	R	E	R	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	Y	A	P	K	A	E	R	K	V	N	K	P	M	Q	G	H	F	A	K	A	G	V	A	P	T	R	I	L	R	E	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	A	P	D	G
Template Known Secondary structure		.	.	.	.	.	.	.		S				G	G	G											T	T	T					S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.																																				.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.													.
Query SS confidence																																												.	.													.
Query Sequence		Q	Q	V	P	V	N	Q	V	F	G	Q	D	E	M	I	D	V	I	G	V	T	K	G	K	G	Y	K	G	V	T	S	R	W	H	T	K	K	L	P	R	K	T	.	.	H	R	G	L	R	K	V	A	C	I	G	A	.	W	H	P	A	R	V	A	F	S	V	A	R	A	G	Q	K	G	Y	H	H	R	T	E
Query Conservation																																												.	.													.
Alig confidence							.																																					.	.													.
Template Conservation							.
Template Sequence		D	S	V	N	V	.	D	I	F	A	E	G	E	K	I	D	A	T	G	T	S	K	G	K	G	T	Q	G	V	M	K	R	W	N	F	A	G	G	P	A	S	H	G	S	K	K	W	H	R	R	P	G	S	I	G	Q	R	K	T	P	G	R	V	Y	K	G	K	R	M	A	G	H	M	G	M	E	R	V	T	V
Template Known Secondary structure					S	T	.	T	T	S		T	T																												S	S	S	S		S	S		S		S							S	S	T	T		S			T	T
Template Predicted Secondary structure							.
Template SS confidence
		89	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	K	K	I	Y	K	I	G	Q	G	Y	L	I	K	D	G	K	L	I	K	N	N	A	S	T	D	Y	D	L	S	D	K	S	I	N	P	L	G	G	F	V	H	Y	G	E	V	T	N	D	F	V	M	L	K	G	C	V	V	G	T	K	K	R	V	L	T	L	R	K	S	L	L	V	Q
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	L	E	V	V	E	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	N	L	I	L	V	K	G	A	I	P	G	A	N	G	G	L	V	V	L	R	S	A	A	K	A	S
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T						S			S	S		T	T							B		S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.																																						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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