Job Description P39023 Confidence 100.00% Date Thu Apr 26 09:26:30 BST 2012 Rank 6 Aligned Residues 329 % Identity 37% Template d1vqob1 SCOP info Reductase/isomerase/elongation factor common domain Translation proteins Ribosomal protein L3 Resolution 2.20

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	P	R	H	G	S	L	G	F	L	P	R	K	R	S	S	R	H	R	G	K	V	K	S	F	P	K	D	D	P	S	K	P	V	H	L	T	A	F	L	G	Y	K	A	G	M	T	H	I	V	R	E	V	D	R	P	G	S	K	V	N	K	K	E	V	V	E	A	V	T	I	V	E	T	P	P	M	V	V
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		S	R	P	R	K	G	S	L	G	F	G	P	R	K	R	S	T	S	E	T	P	R	F	N	S	W	P	S	D	D	G	Q	P	G	.	.	V	Q	G	F	A	G	Y	K	A	G	M	T	H	V	V	L	V	N	D	E	P	N	S	P	R	E	G	M	E	E	T	V	P	V	T	V	I	E	T	P	P	M	R	A
Template Known Secondary structure						S	S		S	S	S		S					S		S	S				S					S		S	S			.	.																					T	T	S	T	T	T	T	S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	I	V	G	Y	V	E	T	P	R	G	L	R	T	F	K	T	V	F	A	E	H	I	S	D	E	C	K	R	R	F	Y	K	N	W	H	K	S	K	K	K	A	F	T	K	Y	C	K	K	W	Q	D	E	D	G	K	K	Q	L	E	K	D	F	S	S	M	K	K	Y	C	Q	V	I	R	V	I	A	H	T
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	L	R	A	Y	E	D	T	P	Y	G	Q	R	P	L	T	E	V	W	T	D	E	F	H	S	E	L	D	R	T	L	D	V	P	E	D	H	D	P	D	A	A	E	E	Q	I	R	D	A	H	E	A	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	D	L	R	L	I	T	H	T
Template Known Secondary structure											T	T											S				T	T	G	G	G	T	S				S	S																	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																.	.	.	140	.	.	.	.	.	.
		167	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure								.																														.	.
Query SS confidence								.																														.	.
Query Sequence		Q	M	R	L	L	P	.	L	R	Q	K	K	A	H	L	M	E	I	Q	V	N	G	G	T	V	A	E	K	L	D	W	A	R	E	R	L	.	.	E	Q	Q	V	P	V	N	Q	V	F	G	Q	D	E	M	I	D	V	I	G	V	T	K	G	K	G	Y	K	G	V	T	S	R	W	H	T	K	K	L	P	R	K
Query Conservation								.																														.	.
Alig confidence								.																														.	.
Template Conservation
Template Sequence		V	P	D	A	V	P	S	V	P	K	K	K	P	D	V	M	E	T	R	V	G	G	G	S	V	S	D	R	L	D	H	A	L	D	I	V	E	D	G	G	E	H	A	M	N	D	I	F	R	A	G	E	Y	A	D	V	A	G	V	T	K	G	K	G	T	Q	G	P	V	K	R	W	G	V	Q	K	R	K	G	K
Template Known Secondary structure			G	G	G		T	T	S				S										S	S																T					G	G	G	T			T	T																												G	G
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		244			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		T	.	.	H	R	G	L	R	K	V	A	C	I	G	A	W	H	P	A	R	V	A	F	S	V	A	R	A	G	Q	K	G	Y	H	H	R	T	E	I	N	K	K	I	Y	K	I	G	Q	G	Y	L	I	K	D	G	K	L	I	K	N	N	A	S	T	D	Y	D	L	S	D	K	S	I	N	P	L	G	G	F	V
Query Conservation			.	.
Alig confidence			.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	R	Q	G	W	R	R	R	I	G	N	L	G	P	W	N	P	S	R	V	R	S	T	V	P	Q	Q	G	Q	T	G	Y	H	Q	R	T	E	L	N	K	R	L	I	D	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	D	E	P	T	V	D	G	G	F	V
Template Known Secondary structure		G	G	S	S	S		S	S			S		S			S	S	S	S	S			T	T	S							S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T			T	T		B	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.																						.	.	.	.	.	.	280	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	G	E	V	T	N	D	F	V	M	L	K	G	C	V	V	G	T	K	K	R	V	L	T	L	R	K	S	L	L	V	Q	T	K	R	R	A	L	E	K	I	D	L	K	F	I	D	T	T	S	K	F	G
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		N	Y	G	E	V	D	G	P	Y	T	L	V	K	G	S	V	P	G	P	D	K	R	L	V	R	F	R	P	A	V	R	P	N	D	Q	P	.	.	R	L	D	P	E	V	R	Y	V	S	N	E	S	N	Q	G
Template Known Secondary structure		T	T	B											S			S	S		T	T									S	S		S	S			.	.			S											S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions