Job Description P39023 Confidence 4.83% Date Thu Apr 26 09:26:30 BST 2012 Rank 53 Aligned Residues 21 % Identity 29% Template c3qqcA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit b, dna-directed rna PDBTitle: crystal structure of archaeal spt4/5 bound to the rnap clamp domain Resolution 3.30 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	A	E	K	L	D	W	A	R	E	R	L	E	Q	Q	V	P	V	N	Q	V	F	G	Q	D	E
Query Conservation
Alig confidence									.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		T	L	A	Q	R	L	K	.	.	.	.	.	.	G	F	E	I	T	V	Q	H	L	F	E	A	A	E
Template Known Secondary structure									.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		364	.	.	.	.	.	370							.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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