Return to main results Retrieve Phyre Job Id

Job DescriptionP39023
Confidence3.95%DateThu Apr 26 09:26:30 BST 2012
Rank72Aligned Residues49
% Identity20%Templatec3bbnI_
PDB info PDB header:ribosomeChain: I: PDB Molecule:ribosomal protein s9; PDBTitle: homology model for the spinach chloroplast 30s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome.
Resolution9.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190.........200.........210.........220.........230
Predicted Secondary structure 
















Query SS confidence 
















































Query Sequence  EIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKG
Query Conservation 

 
 

 
 



 
   




 
 


  
  


 
 







Alig confidence 
















































Template Conservation   
 


     

      
  
  

         

   
 


 

Template Sequence  KFIINYRDAKEYLQGNPLWLQYVKTPLATLGYETNYDVFVKAHGGGLSG
Template Known Secondary structure 
TTS
S

GGGTTTSTTT
TTTSS
Template Predicted Secondary structure 

















Template SS confidence 
















































   93......100.........110.........120.........130.........140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions