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Job DescriptionP06239
Confidence100.00%DateWed May 9 17:41:23 BST 2012
Rank221Aligned Residues236
% Identity22%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260..... ....270...... ...280.........290..... ....300......... 310.....
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Query Sequence  ETLKLVERLGAGQFGEVWMGYYN. GHTKVAVKSLK. . . . QGSMSPDAFLAEANLMKQL. QHQRLVRLYAVVTQ. EPIYII
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV
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TTTTT

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   353......360.........370.........380.........390.........400.........410.........420.........430..
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT
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Template Sequence  MEFVNGGDLMFHIQKSR. . RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICGTPD
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   433......440......... 450.........460.........470.........480.........490.........500.........510
 
   396...400.........410.........420.........430.........440.........450.........460.........470.....
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Query Sequence  AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL
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Template Sequence  . . . . . . . . . . YIAPEILQEMLYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTWLHEDATGILKS
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   520.........530.........540......... 550.........560......... 570.........580.......
 
   476...480...... ...490..
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Query Sequence  CWKERPEDRPT. . . . . . FDYLRS
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Template Sequence  FMTKNPTMRLGSLTQGGEHAILR
Template Known Secondary structure  T
SSGGGSTTSGGGT
TT
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   588.590.........600.........610
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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