Job Description P06239 Confidence 99.81% Date Wed May 9 17:41:23 BST 2012 Rank 357 Aligned Residues 127 % Identity 24% Template c3qwyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cell death abnormality protein 2; PDBTitle: ced-2 Resolution 2.52 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.
Query Sequence		N	S	L	E	P	E	P	W	F	F	K	N	L	S	R	K	D	A	E	R	Q	L	L	A	P	G	N	T	H	G	S	F	L	I	R	E	S	E	S	T	A	G	S	F	S	L	S	V	R	D	F	D	Q	N	Q	G	E	V	V	K	H	Y	K	I	R	N	L	D	N	G	.	.	.	.	.	.	G	F	Y	I
Query Conservation																																																																								.	.	.	.	.	.
Alig confidence																																									.														.	.																.	.	.	.	.	.
Template Conservation																																									.														.	.
Template Sequence		D	P	F	E	W	R	S	F	Y	F	P	G	M	S	R	E	E	A	H	K	L	L	G	E	P	Q	V	S	I	G	T	F	L	M	R	D	S	S	R	.	P	G	E	Y	S	L	T	V	R	E	A	D	E	.	.	G	N	A	V	C	H	Y	L	I	E	R	G	E	P	K	E	D	G	T	A	A	A	G	V	K
Template Known Secondary structure			G	G	G	G	G	G	G			T	T												S	T	T			T	T								S	S	.	T	T										S	S	.	.	S	S														T	T	T	T
Template Predicted Secondary structure																																									.														.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	R	I	T	F	P	G	L	H	E	L	V	R	H	Y	T	N	A	S	D	G	L	C	T	R	L	S	R	P	C	Q	T	Q	K	P	Q	K	P	W	W	E	D	E	W	E	V	P	R	E	T	L	K	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	N	Q	S	F	P	D	I	P	A	L	L	N	H	F	K	M	R	V	L	T	E	A	S	L	L	A	A	Y	K	K	P	I	I	E	V	V	V	G	T	F	K	F	T	G	E	R	E	T	D	L	P	F	E	Q
Template Known Secondary structure			T	T				S	S											S		S	S	S																		S	S		B			S	S	T	T	B			B		T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions