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Job DescriptionP06239
Confidence100.00%DateWed May 9 17:41:23 BST 2012
Rank44Aligned Residues249
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240......... 250.........260.... .....270.........280.........290.........300.........
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Query Sequence  DEWEVPRETLKLVE. . . . RLGAGQFGEVWMGYY. NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ.
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Template Sequence  PGMYVRKKEGKIGESYFKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKK. . FHEEIYNEISLLKSLDHPNIIKLFDVFEDK
Template Known Secondary structure  GGGG


S
GGGT

TTT



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S
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   42.......50.........60.........70.........80......... 90.........100.........110.........
 
   310.........320.........330.........340.........350.........360.........370.. .......380......
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Query Sequence  EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV. . . SDTLSCKIADFGLA
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Template Sequence  KYFYLVTEFYEGGELFEQIINRH. . KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS
Template Known Secondary structure  S

TT
BS..


TT
S

SGGGSSTT

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TT
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   138.140.........150.........160 .........170.........180.........190.........200.........210.....
 
   387..390.........400.........410.........420.........430.........440.........450.........460...
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Query Sequence  RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD. . .
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Template Sequence  SFFSKDYKLRDR. . LGTAYYIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWK
Template Known Secondary structure 

TTS
B


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B
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   216...220....... ..230.........240. ........250.........260. ........270.........280.........290.
 
   464.....470.........480.........490..
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Query Sequence  NCPEELYQLMRLCWKERPEDRPTFDYLRS
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Template Sequence  NISDEAKELIKLMLTYDYNKRCTAEEALN
Template Known Secondary structure  TS
T
SSTTTS

T
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   292.......300.........310.........320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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