Job Description P06239 Confidence 100.00% Date Wed May 9 17:41:23 BST 2012 Rank 233 Aligned Residues 236 % Identity 15% Template c3otvC_ PDB info PDB header:transferase Chain: C: PDB Molecule:probable conserved transmembrane protein; PDBTitle: crystal structure of the intracellular domain of rv3910 from2 mycobacterium tuberculosis Resolution 3.09 Å

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																						.																				.	.	.	.
Query SS confidence																																						.																				.	.	.	.
Query Sequence		P	Q	K	P	W	W	E	D	E	W	E	V	P	R	E	T	L	K	L	V	E	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	.	N	G	H	T	K	V	A	V	K	S	L	K	Q	G	S	M	S	P	D	.	.	.	.	A	F	L	A	E	A	N	L	M	K	Q	L	Q	H	Q	R	L	V	R	L
Query Conservation																																						.																				.	.	.	.
Alig confidence																																						.																				.	.	.	.
Template Conservation
Template Sequence		P	D	D	V	Q	L	V	P	G	A	R	I	A	N	G	R	Y	R	L	L	I	F	H	G	G	V	P	P	L	Q	F	W	Q	A	L	D	T	A	L	D	R	Q	V	A	L	T	F	V	D	P	Q	G	V	L	P	D	D	V	L	Q	E	T	L	S	R	T	L	R	L	S	R	I	D	K	P	G	V	A	R	V
Template Known Secondary structure				S					T	T				T	T	T	T											T	T									T	T	T	T										T	T			S														T	T	T	T				T	T	B
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		304	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		Y	A	V	V	T	Q	.	E	P	I	Y	I	I	T	E	Y	M	E	N	G	S	L	V	D	F	L	K	T	P	S	G	I	K	L	T	I	N	K	L	L	D	M	A	A	Q	I	A	E	G	M	A	F	I	E	E	R	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	S	D	T	L	S	C	K	I	A	D
Query Conservation								.
Alig confidence								.																							.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		L	D	V	V	H	T	R	A	G	G	L	V	V	A	E	W	I	R	G	G	S	L	Q	E	V	A	D	T	S	.	.	.	.	P	S	P	V	G	A	I	R	A	M	Q	S	L	A	A	A	A	D	A	A	H	R	A	G	V	A	L	S	I	D	H	P	S	R	V	R	V	S	I	D	G	D	V	V	L	A	Y
Template Known Secondary structure								S	S	S																		T	T		.	.	.	.																							T	T							S	G	G	G					T	T	S						S
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	L	A	R	L	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	Y	G	T	F	T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	I	V	T	H	G	R	I	P	Y	P	G	M	T	N	P	E	V	I	Q	N	L	E	R	G	Y	R	M	V	R	P
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		P	A	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	A	N	P	Q	D	D	I	R	G	I	G	A	S	L	Y	A	L	L	V	.	N	R	W	P	L	P	E	A	G	V	R	S	G	L	A	P	A	E	R	D	T	A	G	Q	P	I
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																				.	S		B		S				S	S			S			B			B		T	T	S		B
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		169	170	.	.																													.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		463							.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	N	C	P	E	E	L	Y	Q	L	M	R	L	C	W	K	E	R	P	E	D	R	P	T	F	D	Y	L	R	S	V	L	E	D	F	F
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																								.
Template Conservation																																.
Template Sequence		E	P	A	D	I	D	R	D	I	P	F	Q	I	S	A	V	A	A	R	S	V	Q	G	D	G	G	I	R	S	A	.	S	T	L	L	N	L	M	Q	Q	A	T
Template Known Secondary structure			S	T	T	T		T	T	S													S	S	S	S						.
Template Predicted Secondary structure																																.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions