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Job DescriptionP06239
Confidence100.00%DateWed May 9 17:41:23 BST 2012
Rank203Aligned Residues244
% Identity24%Templatec3lm0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase 17b; PDBTitle: crystal structure of human serine/threonine kinase 17b (stk17b)
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260..... ....270.........280. ........290...... ...300......... 310...
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Query Sequence  VPRETLKLVERLGAGQFGEVWMGYYN. GHTKVAVKSLKQGSMS. . . PDAFLAEANLMKQLQ. HQRLVRLYAVVTQ. EPIY
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Template Sequence  FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII
Template Known Secondary structure 
SSTTT

STT
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SS
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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE
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Template Sequence  LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS. . . . . . . SIYPLGDIKIVDF
Template Known Secondary structure 

TTGGGGGSGGG
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   108.110.........120.........130.........140.........150.........160....... ..170.........180
 
   394.....400.........410.........420.........430.........440.........450.........460.. .......470
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Query Sequence  YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP. . . DNCPEELY
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Template Sequence  GMSRKIMGTP. EYLAPEILNYDPITTATDMWNIGIIAYMLLT. HTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLAT
Template Known Secondary structure  TT
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SG.GG

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   181........190 .........200.........210.........220. ........230.........240.........250........
 
   471........480.........490..
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Query Sequence  QLMRLCWKERPEDRPTFDYLRS
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Template Sequence  DFIQSLLVKNPEKRPTAEICLS
Template Known Secondary structure  S
SSGGGS

T
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   268.270.........280.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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