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Job DescriptionP06239
Confidence100.00%DateWed May 9 17:41:23 BST 2012
Rank63Aligned Residues239
% Identity26%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260..... ....270.........280.........290.........300......... 310.........320
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Query Sequence  ETLKLVERLGAGQFGEVWMGYYN. GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ. EPIYIITEYME
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
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   60.........70.. .......80.........90..... ....100.........110.........120.........130....
 
   321........330.........340.........350.........360.........370.. .......380.........390.......
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Query Sequence  NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV. . . SDTLSCKIADFGLARLIEDNEYTAR
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Template Sequence  GGELFDEIIHRM. . KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE
Template Known Secondary structure  S
BS..S

TT
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TT

BTTB
B

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   143......150.... .....160.........170.........180.........190.........200.........210.........220
 
   398.400.........410.........420.........430.........440.........450....... ..460.........470....
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Query Sequence  EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY. . . RMVRPDNCPEELYQLMR
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Template Sequence  R. . LGTAYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK
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SGGGTTS
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   221 ........230.... .....240.........250..... ....260.........270.........280.........290......
 
   475....480.........490..
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Query Sequence  LCWKERPEDRPTFDYLRS
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Template Sequence  QMLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   297..300.........310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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