Job Description P06239 Confidence 100.00% Date Wed May 9 17:41:23 BST 2012 Rank 180 Aligned Residues 255 % Identity 16% Template c3dzoA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rhoptry kinase domain; PDBTitle: crystal structure of a rhoptry kinase from toxoplasma gondii Resolution 1.80 Å

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																							.																								.	.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence																							.																								.	.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		L	K	L	V	E	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	.	G	H	T	K	V	A	V	K	S	L	K	Q	G	S	M	S	P	D	A	F	L	A	E	.	.	.	A	N	L	M	K	Q	L	Q	H	Q	R	L	V	R	L	Y	A	V	V	T	Q	E	P	.	.	.	.	.	.	.	.	.
Query Conservation																							.																								.	.	.																								.	.	.	.	.	.	.	.	.
Alig confidence																							.																								.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	R	G	T	V	L	G	Q	E	D	P	Y	A	Y	L	E	A	T	D	Q	E	T	G	E	S	F	E	V	H	V	P	Y	F	T	E	R	A	I	K	Q	M	K	E	E	V	L	R	L	R	L	L	R	G	I	K	N	Q	K	Q	A	K	V	H	L	R	F	I	F	P	F	D	L	V	K	D	P	Q	V	L
Template Known Secondary structure												T	T									T	T	T												S													G	G	G	G	S	T	T			S								T		B
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
			312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330						.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure		.																				.	.	.	.	.
Query SS confidence		.																				.	.	.	.	.
Query Sequence		.	I	Y	I	I	T	E	Y	M	E	N	G	S	L	V	D	F	L	K	T	.	.	.	.	.	P	S	G	I	K	L	T	I	N	K	L	L	D	M	A	A	Q	I	A	E	G	M	A	F	I	E	E	R	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	S	D	T	L	S	C	K	I	A	D	F	G	L
Query Conservation		.																				.	.	.	.	.
Alig confidence		.									.											.	.	.	.	.
Template Conservation											.
Template Sequence		S	R	F	F	L	Y	P	R	M	.	Q	S	N	L	Q	T	F	G	E	V	L	L	S	H	S	S	T	H	K	S	L	V	H	H	A	R	L	Q	L	T	L	Q	V	I	R	L	L	A	S	L	H	H	Y	G	L	V	H	T	Y	L	R	P	V	D	I	V	L	D	Q	R	G	G	V	F	L	T	G	F	E	H
Template Known Secondary structure		S									.	S														T	T	T	S																									T	T				S				G	G	G					T	T								G	G	G
Template Predicted Secondary structure											.
Template SS confidence
		356	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.					.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																				.	.	.	.														.
Query SS confidence																				.	.	.	.														.
Query Sequence		A	R	L	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	.	.	.	.	I	K	W	T	A	P	E	A	I	N	Y	G	T	.	F	T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	I	V	T	H	G	R	I	P	Y	P	G	M	T	N	P	E	V	I	Q	N	L	E	R	G	Y	R	M	V
Query Conservation																				.	.	.	.														.
Alig confidence																				.	.	.	.														.																				.																			.	.	.	.	.
Template Conservation																																																									.																			.	.	.	.	.
Template Sequence		L	V	R	D	G	A	S	A	V	S	P	I	G	R	G	F	A	P	P	E	T	T	A	E	R	M	L	P	F	G	Q	H	H	P	T	L	M	T	F	A	F	D	T	W	T	L	G	L	A	I	Y	W	I	W	C	.	A	D	L	P	N	T	D	D	A	A	L	G	G	S	E	W	I	F	.	.	.	.	.	R
Template Known Secondary structure					T	T									T	T	T										T	S	T	T	G	G	G																								.	S	S					T	T	G	G	G	S		S	G	G	G	G	.	.	.	.	.	S
Template Predicted Secondary structure																																																									.																			.	.	.	.	.
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.						.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.						.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		R	P	D	N	C	P	E	E	L	Y	Q	L	M	R	L	C	W	K	E	R	P	E	D	R	P	T	F	D	Y	L	R	.	.	.	.	.	S	V	L	E	D	F	F	T	A	T	E	G	Q	Y	Q
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.
Template Conservation
Template Sequence		S	C	K	N	I	P	Q	P	V	R	A	L	L	E	G	F	L	R	Y	P	K	E	D	R	L	L	P	L	Q	A	M	E	T	P	E	Y	E	Q	L	R	T	E	L	S	A	A	L	P	L	Y	Q
Template Known Secondary structure		S																T		S	S	G	G	G	S							T	T	S														G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions