Return to main results Retrieve Phyre Job Id

Job DescriptionP06239
Confidence100.00%DateWed May 9 17:41:23 BST 2012
Rank102Aligned Residues242
% Identity22%Templatec2zv2A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase kinase 2; PDBTitle: crystal structure of human calcium/calmodulin-dependent protein kinase2 kinase 2, beta, camkk2 kinase domain in complex with sto-609
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260...... ...270.........280.........290.........300.........310. ....
Predicted Secondary structure 












.















...
Query SS confidence 


























.












































. . .



Query Sequence  VPRETLKLVERLGAGQFGEVWMGYYNG. HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP. . . IYII
Query Conservation 
      
   

 
 

 
  
    .   



 
         
  
   
  
 
 


 
 
      ...  

Alig confidence 











..












.











....




























...



Template Conservation    
  
 
   
..
  
 
       
   



 
   ....     
   
  
 
 


                
Template Sequence  VQLNQYTLKDEI. . GKYGVVKLAYNENDNTYYAMKVLSKK. . . . EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMV
Template Known Secondary structure 
TT..


TTTT

....
T


TTB


SSSS
Template Predicted Secondary structure 




..








....












Template SS confidence 















































































   161........170.. .......180.........190........ .200.........210.........220.........230....
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT
Query Conservation   
    


   
       
          


 

 


   






  


       

 




         
Alig confidence 












...































































Template Conservation   
      
    ...            
   
   
  

   
 
 

   

         
 
 
           
Template Sequence  FELVNQGPVMEVP. . . TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL
Template Known Secondary structure 

TT
BS

SS...
SS


TT




GGG
TTS



TT

SSSS
Template Predicted Secondary structure 










...
































Template SS confidence 















































































   268.270.........280 .........290.........300.........310.........320.........330.........340....
 
   396...400.........410...... ...420.........430.........440.........450... ......460.........470.
Predicted Secondary structure 









...











.











Query SS confidence 




















. . .




































.

















Query Sequence  AREGAKFPIKWTAPEAINYGT. . . FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL. ERGYRMVRPDNCPEELYQ
Query Conservation         
  
 


 
    ... 
 










 

 
 
  
       
    
.    
   
   
  
  
Alig confidence 







.











...


















.
















.

















Template Conservation          .    

              





 





 .
  

           
                   
Template Sequence  LSNTVGTP. AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVF. GQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKD
Template Known Secondary structure 



S
G.GG

GGG

TT


S.SS
SS

SS





SSS


Template Predicted Secondary structure 





.














.





















Template SS confidence 















































































   345....350.. .......360.........370.........380...... ...390.........400.........410.........420..
 
   472.......480.........490..
Predicted Secondary structure 






Query SS confidence 




















Query Sequence  LMRLCWKERPEDRPTFDYLRS
Query Conservation 

  
   

  


   
  
Alig confidence 




















Template Conservation 

   
  

  


  


 
Template Sequence  LITRMLDKNPESRIVVPEIKL
Template Known Secondary structure  T
S
TTTS

TT
Template Predicted Secondary structure 







Template SS confidence 




















   423......430.........440...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions