Job Description P06239 Confidence 100.00% Date Wed May 9 17:41:23 BST 2012 Rank 42 Aligned Residues 261 % Identity 23% Template c2wtkC_ PDB info PDB header:transferase/metal-binding protein Chain: C: PDB Molecule:serine/threonine-protein kinase 11; PDBTitle: structure of the heterotrimeric lkb1-stradalpha-mo25alpha2 complex Resolution 2.65 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																											.										.	.	.	.	.
Query SS confidence																											.										.	.	.	.	.
Query Sequence		T	L	K	L	V	E	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	G	H	T	.	K	V	A	V	K	S	L	K	Q	.	.	.	.	.	G	S	M	S	P	D	A	F	L	A	E	A	N	L	M	K	Q	L	Q	H	Q	R	L	V	R	L	Y	A	V	V	T	Q	E	P	I	Y	I	I	T	E
Query Conservation																											.										.	.	.	.	.
Alig confidence																											.										.	.	.	.	.
Template Conservation
Template Sequence		K	Y	L	M	G	D	L	L	G	E	G	S	Y	G	K	V	K	E	V	L	D	S	E	T	L	C	R	R	A	V	K	I	L	K	K	K	K	L	R	R	I	P	N	G	E	A	N	V	K	K	E	I	Q	L	L	R	R	L	R	H	K	N	V	I	Q	L	V	D	V	L	Y	N	E	K	M	Y	M	V	M	E
Template Known Secondary structure			B										S	S								B	T	T	T																	S	T	T													T	T				T	T	B
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		Y	M	E	N	G	S	L	V	D	F	L	K	T	P	S	G	I	K	L	T	I	N	K	L	L	D	M	A	A	Q	I	A	E	G	M	A	F	I	E	E	R	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	S	D	T	L	S	C	K	I	A	D	F	G	L	A	R	L	I	E	D	N	E	Y	T	.	A
Query Conservation																																																																																.
Alig confidence							.																																																																									.
Template Conservation							.
Template Sequence		Y	C	V	C	G	.	M	Q	E	M	L	D	S	V	P	E	K	R	F	P	V	C	Q	A	H	G	Y	F	C	Q	L	I	D	G	L	E	Y	L	H	S	Q	G	I	V	H	K	D	I	K	P	G	N	L	L	L	T	T	G	G	T	L	K	I	S	A	L	G	V	A	E	A	L	H	P	F	A	A	D	D	T
Template Known Secondary structure				S			.								S	T	T		S																							T	T				S			S	G	G	G					T	T									T	T						T	T		S	S
Template Predicted Secondary structure							.
Template SS confidence
		131	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.			.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	Y	G	T	.	.	F	T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	I	V	T	H	G	R	I	P	Y	P	G	M	T	N	P	E	V	I	Q	N	L	E	R	G	Y	R	M	V	R	P	D	N	C	P	E	E	L	Y	Q	L	M	R
Query Conservation																						.	.
Alig confidence																						.	.																				.																					.
Template Conservation																																											.																					.
Template Sequence		C	R	T	S	Q	G	S	P	A	F	Q	P	P	E	I	A	N	G	L	D	T	F	S	G	F	K	V	D	I	W	S	A	G	V	T	L	Y	N	I	T	T	.	G	L	Y	P	F	E	G	D	N	I	Y	K	L	F	E	N	I	G	K	G	.	S	Y	A	I	P	G	D	C	G	P	P	L	S	D	L	L	K
Template Known Secondary structure							S		G	G	G							T			S				S																		.	S	S		S				S	S												.						S	S	S
Template Predicted Secondary structure																																											.																					.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	W	K	E	R	P	E	D	R	P	T	F	D	Y	L	R	S	V	L	E	D	F	F	T	A	T	E	G	Q	Y	Q	P	Q	P
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		G	M	L	E	Y	E	P	A	K	R	F	S	I	R	Q	I	R	Q	.	.	H	S	W	F	R	K	K	H	P	P	E	A	P	V	P
Template Known Secondary structure				T		S	S	T	T	T	S									.	.	S					S
Template Predicted Secondary structure																				.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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