Job Description P06239 Confidence 99.89% Date Wed May 9 17:41:23 BST 2012 Rank 330 Aligned Residues 117 % Identity 21% Template c2vifA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide Resolution 1.45 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	P	F	N	F	V	A	K	A	N	S	L	E	P	E	P	W	F	F	K	N	L	S	R	K	D	A	E	R	Q	L	L	A	P	G	N	T	H	G	S	F	L	I	R	E	S	E	S	T	A	G	S	F	S	L	S	V	R	D	F	D	Q	N	Q	G	E	V	V	K	H	Y	K	I	R	N	L	D	N	G
Query Conservation
Alig confidence																																		.	.																														.	.	.	.	.
Template Conservation																																		.	.																														.	.	.	.	.
Template Sequence		M	V	Q	S	S	L	T	E	E	L	K	K	L	A	K	Q	G	W	Y	W	G	P	I	T	R	W	E	A	E	G	K	L	.	.	A	N	V	P	D	G	S	F	L	V	R	D	S	S	D	D	R	Y	L	L	S	L	S	F	R	S	H	G	K	.	.	.	.	.	T	L	H	T	R	I	E	H	S	N	G	R
Template Known Secondary structure																		T		B			S										T	.	.	T	T	S		T	T								S	S	T	T		S								T	T		.	.	.	.	.										T	T
Template Predicted Secondary structure																																		.	.																														.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.
		190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		G	F	Y	I	.	.	S	P	R	I	T	F	P	G	L	H	E	L	V	R	H	Y	T	N	A	S	D	G	L	C	T	R	L	S	R	P	C	Q	T	Q	K	P	Q	K	P	W
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		F	S	F	Y	E	Q	P	D	V	E	G	H	T	S	I	V	D	L	I	E	H	S	I	G	D	S	E	N	G	A	F	C	Y	S	R	S	R	L	P	G	S	A	T	Y	P	V
Template Known Secondary structure					T	T			S				B	S	S															T						S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions