251 c2vagA_ Probab=100.00  E-value=2.1e-37  Score=225.94  Aligned_columns=253  Identities=26%

Q ss_pred             CCCHHHEEECCCCCCCCCEEEEEEEECC--CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE------EEEEEEEECC
Q ss_conf             2378886420225747780799999779--9589999988641398999999999985499848------2688756379
Q batch____       239 EVPRETLKLVERLGAGQFGEVWMGYYNG--HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL------VRLYAVVTQE  310 (509)
Q Consensus       239 ei~~~~~~l~~~LG~G~fG~V~~g~~~~--~~~VAvK~l~~~~~~~~~f~~E~~~l~~l~H~nI------V~l~g~~~~~  310 (509)
                      ++-.+++++.++||+|+||.||+|++..  +..||||+++.+....+.+++|+.+|++++|+|+      +.+.+.....
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf             66999987898779999995689888999999999999999986325617821557643222211123322353123324
Q batch____       311 PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE  390 (509)
Q Consensus       311 ~~~iV~E~~~~GsL~~~L~~~~~~~l~~~~~~~~~~qia~gl~yLh~~~iiHrdlk~~Nil~~~~~~~kl~DfGls~~~~  390 (509)
                      ..+..+.....++....................+..+++.++.++|...++|+|+++.|++++..+..++.+|+.++...
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~~  168 (330)
T c2vagA_          89 GHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTLI  168 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEES
T ss_pred             CEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCC
T ss_conf             00001221123675211122211101365655555445555543110122223455415898578862000345433444


Q ss_pred             CCC----------CEEEECCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC-----
Q ss_conf             676----------20110045585658977994799975789999999999999288999988798999999981-----
Q batch____       391 DNE----------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-----  455 (509)
Q Consensus       391 ~~~----------~~~~~~~~~p~~y~APE~l~~~~~s~ksDVwSfGvil~El~t~G~~P~~~~~~~e~~~~i~~-----  455 (509)
                      ...          ............+.+||......++.++|+|++|++++++.+ ++.|+...+..+.+..+..     
T Consensus       169 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  247 (330)
T c2vagA_         169 NPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGPL  247 (330)
T ss_dssp             CCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCSC
T ss_pred             CCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf             4321000146633267542001210232100000111123542102258731004-889887589689999998513889


Q ss_pred             --------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             --------------------------------------9999988568999999999872789778699999999
Q batch____       456 --------------------------------------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  492 (509)
Q Consensus       456 --------------------------------------~~r~~~p~~~p~~l~~li~~c~~~dP~~RPs~~~i~~  492 (509)
                                                            ....+.+..+++++.+||.+||+.||++|||+++|++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         248 PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             CHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             988974420121235465665321000111001233310023565458999999999866588111776789967


