Job Description P06239 Confidence 100.00% Date Wed May 9 17:41:23 BST 2012 Rank 77 Aligned Residues 258 % Identity 39% Template c2qobA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase domain, base structure Resolution 1.65 Å

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.
Predicted Secondary structure																												.	.	.	.																				.	.																											.
Query SS confidence																												.	.	.	.																				.	.																											.
Query Sequence		E	V	P	R	E	T	L	K	L	V	E	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	.	.	.	.	N	G	H	T	K	V	A	V	K	S	L	K	Q	G	S	M	S	P	D	.	.	A	F	L	A	E	A	N	L	M	K	Q	L	Q	H	Q	R	L	V	R	L	Y	A	V	V	T	Q	.	E	P
Query Conservation																												.	.	.	.																				.	.																											.
Alig confidence																												.	.	.	.																				.	.																											.
Template Conservation
Template Sequence		E	L	D	A	T	N	I	S	I	D	K	V	V	G	A	G	E	F	G	E	V	C	S	G	R	L	K	L	P	S	K	K	E	I	S	V	A	I	K	T	L	K	V	G	Y	T	E	K	Q	R	R	D	F	L	G	E	A	S	I	M	G	Q	F	D	H	P	N	I	I	R	L	E	G	V	V	T	K	S	K	P
Template Known Secondary structure		B			G	G	G											S	S	S										T	T	S												T	T																	T	T				T	T	B									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	I	I	T	E	Y	M	E	N	G	S	L	V	D	F	L	K	T	P	S	G	I	K	L	T	I	N	K	L	L	D	M	A	A	Q	I	A	E	G	M	A	F	I	E	E	R	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	S	D	T	L	S	C	K	I	A	D	F	G	L	A	R	L	I	E	D
Query Conservation
Alig confidence																			.	.																																																												.	.
Template Conservation																			.	.																																																												.	.
Template Sequence		V	M	I	V	T	E	M	E	N	G	S	L	D	S	F	L	R	.	.	K	H	D	A	Q	F	T	V	I	Q	L	V	G	M	L	R	G	I	A	S	G	M	K	Y	L	S	D	M	G	Y	V	H	R	D	L	A	A	R	N	I	L	I	N	S	N	L	V	C	K	V	S	D	F	G	L	S	R	V	L	.	.
Template Known Secondary structure									T	T		B							.	.	T	T	T	T		S																						T	T				S				G	G	G					T	T									T	T					.	.
Template Predicted Secondary structure																			.	.																																																												.	.
Template SS confidence
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.			.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	Y	G	T	F	T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	I	V	T	H	G	R	I	P	Y	P	G	M	T	N	P	E	V	I	Q	N	L	E	R	G	Y	R	M	V	R	P	D	N	C	P	E	E	L	Y	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	K	I	P	I	R	W	T	S	P	E	A	I	A	Y	R	K	F	T	S	A	S	D	V	W	S	Y	G	I	V	L	W	E	V	M	S	Y	G	E	R	P	Y	W	E	M	S	N	Q	D	V	I	K	A	V	D	E	G	Y	R	L	P	P	P	M	D	C	P	A	A	L	Y	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.				G	G	G	S																												T	T	T			T	T	T	T													T							T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	R	L	C	W	K	E	R	P	E	D	R	P	T	F	D	Y	L	R	S	V	L	E	D	F	F	T	A	T	E	G	Q	Y	Q	P	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	L	D	C	W	Q	K	D	R	N	N	R	P	K	F	E	Q	I	V	S	I	L	D	K	L	I	R	N	P	G	S	L	K	I	I	T	R
Template Known Secondary structure							T		S	S	G	G	G	S																S	G	G	G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		856	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions