Job Description P06239 Confidence 100.00% Date Wed May 9 17:41:23 BST 2012 Rank 158 Aligned Residues 265 % Identity 15% Template c2jiiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk3 molecule: vaccinia PDBTitle: structure of vaccinia related kinase 3 Resolution 2.00 Å

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.												.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	P	R	E	T	L	K	L	V	E	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	G	H	T	K	V	A	V	K	S	L	K	Q	G	.	.	.	.	.	.	.	.	.	.	.	S	M	S	P	D	A	F	L	A	E	A	N	L	M	K	Q	L	Q	H	Q	R	L	V	R	L	Y	A	V	V
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		D	K	S	G	R	Q	W	K	L	K	S	F	Q	T	R	D	N	Q	G	I	L	Y	E	A	A	P	T	S	K	.	.	F	S	L	K	L	D	A	K	D	G	R	L	F	N	E	Q	N	F	F	Q	R	A	A	K	P	L	Q	V	N	K	W	K	K	L	Y	S	T	P	L	L	A	I	P	T	C	M	G	F	G
Template Known Secondary structure			T	T	S													T	T												.	.								T	T	S	T																								T	T		T	T		S
Template Predicted Secondary structure																															.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		308			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.
Predicted Secondary structure			.	.																																																																								.	.
Query SS confidence			.	.																																																																								.	.
Query Sequence		T	.	.	Q	E	P	I	Y	I	I	T	E	Y	M	E	N	G	S	L	V	D	F	L	K	T	P	S	G	I	K	L	T	I	N	K	L	L	D	M	A	A	Q	I	A	E	G	M	A	F	I	E	E	R	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	S	D	T	L	S	C	K	.	.	I	A	D	F
Query Conservation			.	.																																																																								.	.
Alig confidence			.	.												.																																																												.	.
Template Conservation																.
Template Sequence		V	H	Q	D	K	Y	R	F	L	V	L	P	S	L	.	G	R	S	L	Q	S	A	L	D	V	S	P	K	H	V	L	S	E	R	S	V	L	Q	V	A	C	R	L	L	D	A	L	E	F	L	H	E	N	E	Y	V	H	G	N	V	T	A	E	N	I	F	V	D	P	E	D	Q	S	Q	V	T	L	A	G	Y
Template Known Secondary structure				T	T	T										.											S	G	G	G																								T	T		B		S				G	G	G					T	T										G
Template Predicted Secondary structure																.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.							.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.						.	.	.	.	.	450	.	.
Predicted Secondary structure																.	.	.	.	.	.																																																.	.	.	.	.
Query SS confidence																.	.	.	.	.	.																																																.	.	.	.	.
Query Sequence		G	L	A	R	L	I	E	D	N	E	Y	T	A	R	.	.	.	.	.	.	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	Y	G	T	F	T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	I	V	T	H	G	R	I	P	Y	P	G	M	.	.	.	.	.	T	N	P	E	V	I	Q	N
Query Conservation																.	.	.	.	.	.																																																.	.	.	.	.
Alig confidence																.	.	.	.	.	.																																							.									.	.	.	.	.
Template Conservation																																																												.
Template Sequence		G	F	A	F	R	Y	C	P	S	G	K	H	V	A	Y	V	E	G	S	R	S	P	H	E	G	D	L	E	F	I	S	M	D	L	H	K	G	C	G	P	S	R	R	S	D	L	Q	S	L	G	Y	C	M	L	K	W	L	Y	.	G	F	L	P	W	T	N	C	L	P	N	T	E	D	I	M	K	Q	K	Q	K
Template Known Secondary structure		G	G		B		S	S	G	G	G							T	T	S	S		T	T		S		T	T	T							T	T																						.	S			T	T	G	G	G	T	T
Template Predicted Secondary structure																																																												.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.						.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																																							.
Query SS confidence													.	.	.	.	.																																							.
Query Sequence		L	E	R	G	Y	R	M	V	R	P	D	.	.	.	.	.	N	C	P	E	E	L	Y	Q	L	M	R	L	C	W	K	E	R	P	E	D	R	P	T	F	D	Y	L	R	S	V	L	E	D	F	F	T	A	T	.	E	G	Q	Y	Q	P
Query Conservation													.	.	.	.	.																																							.
Alig confidence													.	.	.	.	.																																							.
Template Conservation
Template Sequence		F	V	D	K	P	G	P	F	V	G	P	C	G	H	W	I	R	P	S	E	T	L	Q	K	Y	L	K	V	V	M	A	L	T	Y	E	E	K	P	P	Y	A	M	L	R	N	N	L	E	A	L	L	Q	D	L	R	V	S	P	Y	D	P
Template Known Secondary structure					S							T	T	S																		T			T	T																			T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions