Job Description A1IGU5 Confidence 100.00% Date Thu Apr 26 09:49:45 BST 2012 Rank 27 Aligned Residues 203 % Identity 20% Template c3odwB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:rho guanine nucleotide exchange factor 1; PDBTitle: crystal structure of the linker-dh/ph domains of p115-rhogef Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																																								.	.	.																																					.	.
Query SS confidence																																								.	.	.																																					.	.
Query Sequence		D	R	S	L	L	H	Q	R	L	A	V	R	E	L	I	D	T	E	V	S	Y	L	H	M	L	Q	L	C	A	S	D	I	R	S	R	L	Q	Q	.	.	.	L	P	Q	G	D	L	D	V	L	F	S	N	I	D	D	I	I	K	V	N	S	R	F	L	H	D	L	Q	E	T	A	S	K	E	E	E	.	.	Q
Query Conservation																																								.	.	.																																					.	.
Alig confidence																																								.	.	.																																					.	.
Template Conservation
Template Sequence		P	K	S	Q	V	K	R	Q	E	V	I	S	E	L	L	V	T	E	A	A	H	V	R	M	L	R	V	L	H	D	L	F	F	Q	P	M	A	E	C	L	F	F	P	L	E	E	L	Q	N	I	F	P	S	L	D	E	L	I	E	V	H	S	L	F	L	D	R	L	M	K	R	R	Q	E	S	I	E	E	I	G
Template Known Secondary structure																																	T								T	S	S									S	T	T																					T
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	L	V	G	N	I	F	L	E	F	Q	E	E	L	E	Q	V	Y	K	V	Y	C	A	S	Y	D	Q	A	L	L	L	V	D	T	Y	R	K	E	P	E	L	Q	R	H	I	Q	G	I	V	E	A	V	V	P	Q	A	G	S	S	G	L	S	F	L	L	V	I	P	L	Q	R	I	T	R	Y	P	L	L	L
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		D	V	L	L	A	R	F	D	G	A	E	G	S	W	F	Q	K	I	S	S	R	F	C	S	R	Q	S	F	A	L	E	Q	L	K	A	K	Q	R	K	D	P	R	F	C	A	F	V	Q	E	A	E	S	.	R	P	R	C	R	R	L	Q	L	K	D	M	I	P	T	E	M	Q	R	L	T	K	Y	P	L	L	L
Template Known Secondary structure									S																	T																											T	.	S	G	G	G	T	T							T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	I	L	E	N	T	V	P	D	A	S	A	Y	P	V	L	Q	R	A	V	S	A	L	Q	D	V	N	T	N	I	N	E	Y	K	M	R	K	E	V	A	S	K	Y	T	K	V	E	Q	L
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		Q	S	I	G	Q	N	T	E	.	E	P	T	E	R	E	K	V	E	L	A	A	E	C	C	R	E	I	L	H	H	V	N	Q	A	V	R	D	M	E	D	L	L	R	L	K	D	Y	Q	R	R
Template Known Secondary structure						T	T			.	S
Template Predicted Secondary structure										.
Template SS confidence
		573	.	.	.	.	.	.	580		.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions