Return to main results Retrieve Phyre Job Id

Job DescriptionA1IGU5
Confidence99.63%DateThu Apr 26 09:49:45 BST 2012
Rank54Aligned Residues84
% Identity18%Templatec3nmzD_
PDB info PDB header:cell adhesion/cell cycleChain: D: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crytal structure of apc complexed with asef
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   580.........590.........600.........610.........620.........630.........640.........650.........
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  AGLNKDPRCLTPEPSPALVPSIPTMNQVIAAYPFVARSSHEVSLQAGQPVTILEAQDKKGNPEWSLVEVNGQRGYVPSGF
Query Conservation                               
 


 
    


   

 
 

   
      

 

  
  
 

 

Alig confidence 
























































....


















Template Conservation 
   
 
                      




 
    



  

 
 
     ....  

 
   
  
 

  
Template Sequence  SHHYSHPGGGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIEVMDATN. . . . REWWWGRVADGEGWFPASF
Template Known Secondary structure 


S


S
S



STS


SS
B



TTB

B
TT


S....SS
SS
GGG
Template Predicted Secondary structure 






































....





Template SS confidence 















































































   172.......180.........190.........200.........210.........220........ .230.........240.......
 
   660.......
Predicted Secondary structure 




Query SS confidence 







Query Sequence  LARARSPV
Query Conservation 
       
Alig confidence 







Template Conservation 
 
     
Template Sequence  VRLRVNQD
Template Known Secondary structure 

S

Template Predicted Secondary structure 


Template SS confidence 







   248.250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions