Job Description A1IGU5 Confidence 100.00% Date Thu Apr 26 09:49:45 BST 2012 Rank 23 Aligned Residues 184 % Identity 21% Template c2rgnB_ PDB info PDB header:signaling protein complex Chain: B: PDB Molecule:rhoa/rac/cdc42 exchange factor; PDBTitle: crystal structure of p63rhogef complex with galpha-q and rhoa Resolution 3.50 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		S	E	D	R	S	L	L	H	Q	R	L	A	V	R	E	L	I	D	T	E	V	S	Y	L	H	M	L	Q	L	C	A	S	D	I	R	S	R	L	Q	Q	.	.	.	.	.	L	P	Q	G	D	L	D	V	L	F	S	N	I	D	D	I	I	K	V	N	S	R	F	L	H	D	L	Q	E	T	A	S	K	E	E
Query Conservation																																										.	.	.	.	.
Alig confidence																																										.	.	.	.	.
Template Conservation
Template Sequence		Q	K	K	K	A	L	E	R	S	M	Y	V	L	S	E	L	V	E	T	E	K	M	Y	V	D	D	L	G	Q	I	V	E	G	Y	M	A	T	M	A	A	Q	G	V	P	E	S	L	R	G	R	D	R	I	V	F	G	N	I	Q	Q	I	Y	E	W	H	R	D	Y	F	L	Q	E	L	Q	R	C	L	K	D	P
Template Known Secondary structure				S																													T	T												S	S	S	G	G	G						T	T											T										S		G
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	Q	L	V	G	N	I	F	L	E	F	Q	E	E	L	E	Q	V	Y	K	V	Y	C	A	S	Y	D	Q	A	L	L	L	V	D	T	Y	R	K	E	P	E	L	Q	R	H	I	Q	G	I	V	E	A	V	V	P	Q	A	G	S	S	G	L	S	F	L	L	V	I	P	L	Q	R	I	T	R	Y	P	L
Query Conservation
Alig confidence		.	.	.																.																						.	.	.	.	.	.	.	.
Template Conservation		.	.	.																.																						.	.	.	.	.	.	.	.
Template Sequence		.	.	.	D	W	L	A	Q	L	F	I	K	H	E	R	R	L	H	.	M	Y	V	V	Y	C	Q	N	K	P	K	S	E	H	V	V	S	E	F	G	D	.	.	.	.	.	.	.	.	S	Y	F	E	E	L	R	Q	Q	L	G	H	R	L	Q	L	N	D	L	L	I	K	P	V	Q	R	I	M	K	Y	Q	L
Template Known Secondary structure		.	.	.	G	G								T	T	T	T	T		.								T	S								T	T	T	S		.	.	.	.	.	.	.	.													S	S						T	T							T	S
Template Predicted Secondary structure		.	.	.																.																						.	.	.	.	.	.	.	.
Template SS confidence
					233	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.									.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	K	I	L	E	N	T	V	P	D	A	S	A	Y	P	V	L	Q	R	A	V	S	A	L	Q	D	V	N	T	N	I	N	E	Y	K	M	R	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	K	D	F	L	K	Y	Y	N	R	A	G	M	D	T	A	D	L	E	Q	A	V	E	V	M	C	F	V	P	K	R	C	N	D	M	M	T	L	G	R
Template Known Secondary structure										T	S	S	S		S																									G	G	G
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions