Job Description A1IGU5 Confidence 100.00% Date Thu Apr 26 09:49:45 BST 2012 Rank 1 Aligned Residues 208 % Identity 23% Template c2dx1A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crystal structure of rhogef protein asef Resolution 2.36 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		R	E	G	R	A	S	E	D	R	S	L	L	H	Q	R	L	A	V	R	E	L	I	D	T	E	V	S	Y	L	H	M	L	Q	L	C	A	S	D	I	R	S	R	L	Q	Q	.	.	.	.	L	P	Q	G	D	L	D	V	L	F	S	N	I	D	D	I	I	K	V	N	S	R	F	L	H	D	L	Q	E	T	A
Query Conservation																																															.	.	.	.
Alig confidence																																															.	.	.	.
Template Conservation
Template Sequence		R	V	N	Q	D	A	Q	S	S	K	D	Q	X	R	T	N	V	I	N	E	I	L	S	T	E	R	D	Y	I	K	H	L	R	D	I	C	E	G	Y	V	R	Q	C	R	K	R	A	D	X	F	S	E	E	Q	L	R	T	I	F	G	N	I	E	D	I	Y	R	C	Q	K	A	F	V	K	A	L	E	Q	R	F
Template Known Secondary structure			S																																					T					T	T		T	T	T											T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	E	E	E	Q	V	Q	L	V	G	N	I	F	L	E	F	Q	E	E	L	E	Q	V	Y	K	V	Y	C	A	S	Y	D	Q	A	L	L	L	V	D	T	Y	R	K	E	P	E	L	Q	R	H	I	Q	G	I	V	E	A	V	V	P	Q	A	G	S	S	G	L	S	F	L	L	V	I	P	L	Q	R	I	T
Query Conservation
Alig confidence																								.																																			.	.
Template Conservation																								.																																			.	.
Template Sequence		N	R	E	R	P	H	L	S	E	L	G	A	C	F	L	E	H	Q	A	D	F	Q	.	I	Y	S	E	Y	C	N	N	H	P	N	A	C	V	E	L	S	R	L	T	K	L	S	K	Y	V	Y	F	F	E	A	C	R	L	.	.	L	Q	K	X	I	D	I	S	L	D	G	F	L	L	T	P	V	Q	K	I	C
Template Known Secondary structure			S	S	S	G	G	G										T						.	T																				T														.	.			T			S
Template Predicted Secondary structure																								.																																			.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	P	L	L	L	Q	K	I	L	E	N	T	V	P	D	A	S	A	Y	P	V	L	Q	R	A	V	S	A	L	Q	D	V	N	T	N	I	N	E	Y	K	M	R	K	E	V	A	S	K	Y	T	K	V	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	P	L	Q	L	A	E	L	L	K	Y	T	H	P	Q	H	R	D	F	K	D	V	E	A	A	L	H	A	X	K	N	V	A	Q	L	I	N	E	R	K	R	R	L	E	N	I	D	K	I	A	Q	W	Q	S
Template Known Secondary structure													T	S		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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