Return to main results Retrieve Phyre Job Id

Job DescriptionA1IGU5
Confidence99.63%DateThu Apr 26 09:49:45 BST 2012
Rank59Aligned Residues76
% Identity12%Templatec2csqA_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:rim binding protein 2; PDBTitle: solution structure of the second sh3 domain of human rim-2 binding protein 2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   588.590.........600.........610....... ..620.........630.........640.........650.........
Predicted Secondary structure 






















........




















Query SS confidence 





























. . . . . . . .









































Query Sequence  CLTPEPSPALVPSIPTMNQVIAAYPFVARS. . . . . . . . SHEVSLQAGQPVTILEAQDKKGNPEWSLVEVNGQRGYVPSGF
Query Conservation                       
 


 
  ........  


   

 
 

   
      

 

  
  
 

 

Alig confidence 





























........



















...


















Template Conservation 


  
   
     
     




              



  

 
 
      ...  
      
  
 

 

Template Sequence  GSSGSSGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDA. . . DGFYRGETCARLGLIPCNM
Template Known Secondary structure 


SSSSS


S





SS
B
TTTTSS
TTB

B
TT

T...T
TTTTT
Template Predicted Secondary structure 









































...






Template SS confidence 















































































   1........10.........20.........30.........40.........50........ .60.........70.......
 
   660......
Predicted Secondary structure 




Query SS confidence 






Query Sequence  LARARSP
Query Conservation 
      
Alig confidence 






Template Conservation 
      
Template Sequence  VSEIQAD
Template Known Secondary structure  S



Template Predicted Secondary structure 



Template SS confidence 






   78.80....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions