Job Description A1IGU5 Confidence 99.87% Date Thu Apr 26 09:49:45 BST 2012 Rank 37 Aligned Residues 192 % Identity 14% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	Q	E	T	F	E	K	V	Q	P	P	P	T	T	Q	P	L	L	P	G	S	E	R	Q	V	Q	A	L	L	S	R	Y	G	P	G	K	L	Y	Q	V	T	S	N	I	S	G	T	G	T	L	D	L	T	L	P	R	G	Q	I	V	A	I	L	Q	N	K	D	T	K	G	N	S	G	R	W	L	V	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S	E	V	A	G
Template Known Secondary structure																														S										S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		553					.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		G	.	.	.	.	G	H	R	G	Y	V	P	A	G	K	L	Q	L	Y	H	V	V	P	S	A	E	E	L	R	R	Q	A	G	L	N	K	D	P	R	C	L	T	P	E	P	S	P	A	L	V	P	S	I	P	T	M	N	Q	V	I	A	A	Y	P	F	V	A	R	S	S	H	E	V	S	L	Q	A	G	Q	P
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.
Template Conservation
Template Sequence		G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V
Template Known Secondary structure		S	S																																															S	S			T	T								S	S		B				S	T	T				B		S	S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		629	630	.	.	.	.	.	.		.	.	.	640	.	.	.	.	.	.											.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure										.											.	.	.	.	.	.	.	.	.	.
Query SS confidence										.											.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	I	L	E	A	Q	D	.	K	K	G	N	P	E	W	S	L	V	.	.	.	.	.	.	.	.	.	.	E	V	N	G	Q	R	G	Y	V	P	S	G	F	L	A	R	A	R
Query Conservation										.											.	.	.	.	.	.	.	.	.	.
Alig confidence										.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V	P
Template Known Secondary structure								S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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