Job Description A1IGU5 Confidence 100.00% Date Thu Apr 26 09:49:45 BST 2012 Rank 17 Aligned Residues 205 % Identity 24% Template c1ki1B_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:intersectin long form; PDBTitle: guanine nucleotide exchange region of intersectin in2 complex with cdc42 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		E	G	R	A	S	E	D	R	S	L	L	H	Q	R	L	A	V	R	E	L	I	D	T	E	V	S	Y	L	H	M	L	Q	L	C	A	S	D	I	R	S	R	L	Q	Q	.	.	.	L	P	Q	G	D	L	D	V	L	F	S	N	I	D	D	I	I	K	V	N	S	R	F	L	H	D	L	Q	E	T	A	S	K
Query Conservation																																														.	.	.
Alig confidence										.	.	.																																		.	.	.
Template Conservation										.	.	.
Template Sequence		D	M	L	T	P	T	E	R	.	.	.	K	R	Q	G	Y	I	H	E	L	I	V	T	E	E	N	Y	V	N	D	L	Q	L	V	T	E	I	F	Q	K	P	L	M	E	S	E	L	L	T	E	K	E	V	A	M	I	F	V	N	W	K	E	L	I	M	C	N	I	K	L	L	K	A	L	R	V	R	K	K	M
Template Known Secondary structure										.	.	.																											T								T	S	S										T	T
Template Predicted Secondary structure										.	.	.
Template SS confidence
		1229	1230	.	.	.	.	.	.				.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.
		96	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		E	E	E	Q	V	.	.	Q	L	V	G	N	I	F	L	E	F	Q	E	E	L	E	Q	V	Y	K	V	Y	C	A	S	Y	D	Q	A	L	L	L	V	D	T	Y	R	K	E	P	E	L	Q	R	H	I	Q	G	I	V	E	A	V	V	P	Q	A	G	S	S	G	L	S	F	L	L	V	I	P	L	Q	R	I	T
Query Conservation							.	.
Alig confidence							.	.																.																																				.
Template Conservation																								.																																				.
Template Sequence		S	G	E	K	M	P	V	K	M	I	G	D	I	L	S	A	Q	L	P	H	M	Q	.	P	Y	I	R	F	C	S	R	Q	L	N	G	A	A	L	I	Q	Q	K	T	D	E	A	P	D	F	K	E	F	V	K	R	L	E	M	.	D	P	R	C	K	G	M	P	L	S	S	F	I	L	K	P	M	Q	R	V	T
Template Known Secondary structure				T	T	S													G	G	G	G	T	.																																			T	.	S	G	G	G	T	T							T	T
Template Predicted Secondary structure																								.																																				.
Template SS confidence
		1306	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.		.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.		.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	P	L	L	L	Q	K	I	L	E	N	T	V	P	D	A	S	A	Y	P	V	L	Q	R	A	V	S	A	L	Q	D	V	N	T	N	I	N	E	Y	K	M	R	K	E	V	A	S	K	Y	T	K	V	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	P	L	I	I	K	N	I	L	E	N	T	P	E	N	H	P	D	H	S	H	L	K	H	A	L	E	K	A	E	E	L	C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A
Template Known Secondary structure												T	T	S		T	T	S	T	T																																				T
Template Predicted Secondary structure
Template SS confidence
		1384	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions