Job Description P04637 Confidence 21.17% Date Fri May 25 09:44:00 BST 2012
Rank 31 Aligned Residues 86
% Identity 21% Template c1w21D_
PDB info
PDB header: hydrolaseChain: D: PDB Molecule: neuraminidase;
PDBTitle: structure of neuraminidase from english duck subtype n62 complexed with 30 mm sialic acid (nana, neu5ac), crystal3 soaked for 43 hours at 291 k.
Resolution 2.08 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
153 . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . .
. . . 210 . . . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
P G T R V R A M A I Y K Q S Q H M T E V V R R C P H H E R C S D S D G L A P P Q H L I R V E G N L R V E Y L .
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D D R N T F R H S V
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
P L C E V N S W H I L S K D N A I .
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R I G E D A H I L V T R E P Y L S C D P Q G C R M F A L S Q G T T L R G R H A N G T I H D R S P F R A L I
Template Known Secondary structure  
B S . . . . . . . . . . T T S T T S S S G G G T T T T S T T
Template Predicted Secondary structure  
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Template SS confidence  
   
3096 . . . 3100 . . . . . . . . . 3110 . .
. . . . . . . 3120 . . . . . . . . . 3130 . . . . . . . . . 3140 . . . . . . . . . 3150 . . . . . . . . . 3160 . . . . .
 
   
217 . . 220 . . . . . . . . . 230 . . . . . . . .
. 240 . . . . . . . . . 250 . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
V V P Y E P P E V G S D C T T I H Y N Y M C .
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N S S C M G G M N R R P I L T
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
S W E M G Q A .
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P S P Y N T R V E C I G W S S T S C H D G M S R M S I C M
Template Known Secondary structure  
T T S . . . . . T T S S S S S S
Template Predicted Secondary structure  
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Template SS confidence  
   
3166 . . . 3170 . .
. . . . . . . 3180 . . . . . . . . . 3190 . . . . . . . . . 3200 .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]