 |
Job Description | P04637 | Confidence | 10.20% | Date | Fri May 25 09:44:00 BST 2012 |
Rank | 47 | Aligned Residues | 29 |
% Identity | 21% | Template | c1imhD_ |
PDB info |
PDB header:transcription/dna | Chain: D: PDB Molecule:nuclear factor of activated t cells 5; |
PDBTitle: tonebp/dna complex
|
Resolution | 2.86 Å |
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | C | N | S | S | C | M | G | G | M | N | . |
. |
. |
. |
. |
. |
. |
. |
R | R | P | I | L | T | I | I | T | L | E | D | S | S | G | N | L | L |
Query Conservation |   |
|
|   |
|
|
|   |
|
|   |
| . | . | . | . | . | . | . | . |
|
|
|
|   |   |
|
|
|
|
|   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |
|
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |
|
Template Sequence |   |
L | H | S | C | S | V | K | G | E | E | E | V | F | L | I | G | K | N | F | L | K | G | T | K | V | I | F | Q | E | N | V | S | D | E | N | S | W |
Template Known Secondary structure |   |
|
|  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |
|
|
| T | T |
|  |  |  |  |  | S | S | S |
| S | S |
| S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
376 | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|